[←][→] ath   AT4G15900 Gene
functional annotation
Function   pleiotropic regulatory locus 1  
GO BP
GO:0009870 [list] [network] defense response signaling pathway, resistance gene-dependent  (15 genes)  IMP  
GO:0010204 [list] [network] defense response signaling pathway, resistance gene-independent  (19 genes)  IMP  
GO:0010182 [list] [network] sugar mediated signaling pathway  (37 genes)  IMP  
GO:0048825 [list] [network] cotyledon development  (54 genes)  IMP  
GO:0009749 [list] [network] response to glucose  (59 genes)  IMP  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IMP  
GO:0045087 [list] [network] innate immune response  (322 genes)  IEA  
GO:0048366 [list] [network] leaf development  (338 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IMP  
GO:0048364 [list] [network] root development  (482 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0010154 [list] [network] fruit development  (753 genes)  IMP  
GO:0009755 [list] [network] hormone-mediated signaling pathway  (774 genes)  IMP  
GO:0006508 [list] [network] proteolysis  (901 genes)  IMP  
GO CC
GO:0005662 [list] [network] DNA replication factor A complex  (8 genes)  IBA  
GO:0000974 [list] [network] Prp19 complex  (11 genes)  IBA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  IBA IPI  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_193325.1 
BLAST NP_193325.1 
Orthologous [Ortholog page] AT3G16650 (ath)  LOC4332781 (osa)  LOC7475907 (ppo)  LOC25488112 (mtr)  LOC100248018 (vvi)  LOC100282926 (zma)  LOC100775526 (gma)  LOC100782357 (gma)  LOC101250160 (sly)  LOC103860812 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 2,  pero 2,  cyto_pero 2  (predict for NP_193325.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_193325.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath00970 Aminoacyl-tRNA biosynthesis 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with PRL1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.6 CHC1 SWIB/MDM2 domain superfamily protein [detail] 831267
7.4 HD1 histone deacetylase 1 [detail] 829969
6.9 MAC3A MOS4-associated complex 3A [detail] 839503
4.3 AT4G26870 Class II aminoacyl-tRNA and biotin synthetases superfamily protein [detail] 828794
Coexpressed
gene list		 [Coexpressed gene list for PRL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245358_at
245358_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245358_at
245358_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245358_at
245358_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827272      
Refseq ID (protein) NP_193325.1 


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