| functional annotation |
| Function |
negative regulator of systemic acquired resistance (SNI1) |
|
| GO BP |
|
GO:0051572 [list] [network] negative regulation of histone H3-K4 methylation
|
(1 genes)
|
IDA
|
 |
|
GO:0002215 [list] [network] defense response to nematode
|
(4 genes)
|
IMP
|
|
|
GO:0010113 [list] [network] negative regulation of systemic acquired resistance
|
(4 genes)
|
IBA
IMP
|
|
|
GO:0016444 [list] [network] somatic cell DNA recombination
|
(9 genes)
|
IMP
|
|
|
GO:0043966 [list] [network] histone H3 acetylation
|
(18 genes)
|
IDA
|
|
|
GO:0009627 [list] [network] systemic acquired resistance
|
(61 genes)
|
TAS
|
|
|
GO:0031348 [list] [network] negative regulation of defense response
|
(63 genes)
|
IMP
|
|
|
GO:0009626 [list] [network] plant-type hypersensitive response
|
(73 genes)
|
IEA
|
|
|
GO:0016570 [list] [network] histone modification
|
(153 genes)
|
IBA
IMP
|
|
|
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated
|
(253 genes)
|
IBA
IDA
IMP
|
|
|
GO:0006281 [list] [network] DNA repair
|
(295 genes)
|
IEA
|
|
|
GO:0006974 [list] [network] cellular response to DNA damage stimulus
|
(329 genes)
|
IMP
|
|
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_567557.1
|
| BLAST |
NP_567557.1
|
| Orthologous |
[Ortholog page]
LOC732620 (gma)
LOC4329134 (osa)
LOC25493046 (mtr)
LOC25496257 (mtr)
LOC100245146 (vvi)
LOC100799607 (gma)
LOC101244924 (sly)
LOC103654875 (zma)
LOC103856393 (bra)
|
Subcellular
localization
wolf |
|
cyto 6,
chlo 1,
nucl 1,
pero 1,
golg 1,
chlo_mito 1,
cysk_nucl 1,
nucl_plas 1
|
(predict for NP_567557.1)
|
|
Subcellular
localization
TargetP |
|
other 8,
mito 3
|
(predict for NP_567557.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03030 |
DNA replication |
10 |
 |
| ath03420 |
Nucleotide excision repair |
5 |
 |
| ath03430 |
Mismatch repair |
5 |
 |
| ath03440 |
Homologous recombination |
5 |
 |
| ath03410 |
Base excision repair |
2 |
 |
Genes directly connected with SNI1 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 10.2 |
POLA3 |
DNA primase POLA3 |
[detail] |
834193 |
| 10.1 |
CTF18 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
839431 |
| 9.9 |
AT5G52950 |
LIM domain protein |
[detail] |
835372 |
| 8.8 |
AT3G60660 |
spindle/kinetochore-associated-like protein |
[detail] |
825237 |
| 6.1 |
AT1G34770 |
melanoma-associated antigen G1-like protein |
[detail] |
840381 |
|
Coexpressed
gene list |
[Coexpressed gene list for SNI1]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
254625_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
254625_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
254625_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT4G18470 Gene
