[←][→] ath   AT4G22930 Gene
functional annotation
Function   pyrimidin 4  
GO BP
GO:0044205 [list] [network] 'de novo' UMP biosynthetic process  (6 genes)  IEA  
GO:0006207 [list] [network] 'de novo' pyrimidine nucleobase biosynthetic process  (9 genes)  IBA  
GO:0006221 [list] [network] pyrimidine nucleotide biosynthetic process  (42 genes)  IBA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IEA ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA  
GO MF
GO:0004151 [list] [network] dihydroorotase activity  (1 genes)  IBA IGI  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00240 [list] [network] Pyrimidine metabolism (57 genes)
Protein NP_001327985.1  NP_194024.1 
BLAST NP_001327985.1  NP_194024.1 
Orthologous [Ortholog page] LOC4325542 (osa)  LOC7469552 (ppo)  LOC11444984 (mtr)  LOC100193190 (zma)  LOC100245511 (vvi)  LOC100804389 (gma)  LOC100815210 (gma)  LOC101249602 (sly)  LOC103860587 (bra)  LOC103861347 (bra) 
Subcellular
localization
wolf
chlo 5,  nucl 2,  mito 1,  vacu 1,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001327985.1)
chlo 5,  nucl 2,  mito 1,  vacu 1,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for NP_194024.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001327985.1)
other 6  (predict for NP_194024.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 7
ath00230 Purine metabolism 3
ath00020 Citrate cycle (TCA cycle) 2
ath00270 Cysteine and methionine metabolism 2
ath00620 Pyruvate metabolism 2
Genes directly connected with PYR4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 IPP2 isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 [detail] 820960
6.4 NDPK3 nucleoside diphosphate kinase 3 [detail] 826702
6.2 MPPalpha mitochondrial processing peptidase alpha subunit [detail] 820896
Coexpressed
gene list		 [Coexpressed gene list for PYR4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254267_at
254267_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254267_at
254267_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254267_at
254267_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828392      
Refseq ID (protein) NP_001327985.1 
NP_194024.1 


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