| functional annotation |
| Function |
tryptophan aminotransferase related 2 |
|
| GO BP |
|
GO:0009684 [list] [network] indoleacetic acid biosynthetic process
|
(11 genes)
|
IGI
|
 |
|
GO:0010078 [list] [network] maintenance of root meristem identity
|
(12 genes)
|
IGI
|
|
|
GO:0010588 [list] [network] cotyledon vascular tissue pattern formation
|
(18 genes)
|
IGI
|
|
|
GO:0080022 [list] [network] primary root development
|
(32 genes)
|
IGI
|
|
|
GO:0009958 [list] [network] positive gravitropism
|
(36 genes)
|
IGI
|
|
|
GO:0043562 [list] [network] cellular response to nitrogen levels
|
(44 genes)
|
IMP
|
|
|
GO:0048825 [list] [network] cotyledon development
|
(54 genes)
|
IGI
|
|
|
GO:0048467 [list] [network] gynoecium development
|
(91 genes)
|
IGI
|
|
|
GO:0010087 [list] [network] phloem or xylem histogenesis
|
(102 genes)
|
IGI
|
|
|
GO:0048527 [list] [network] lateral root development
|
(117 genes)
|
IMP
|
|
|
GO:0009723 [list] [network] response to ethylene
|
(297 genes)
|
IGI
|
|
|
GO:0042742 [list] [network] defense response to bacterium
|
(399 genes)
|
IGI
|
|
|
GO:0009908 [list] [network] flower development
|
(447 genes)
|
IGI
|
|
|
GO:0009793 [list] [network] embryo development ending in seed dormancy
|
(547 genes)
|
IGI
|
|
|
GO:0048367 [list] [network] shoot system development
|
(812 genes)
|
IGI
|
|
|
| GO CC |
|
GO:0005789 [list] [network] endoplasmic reticulum membrane
|
(466 genes)
|
IDA
|
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
|
| GO MF |
|
GO:0080097 [list] [network] L-tryptophan:pyruvate aminotransferase activity
|
(3 genes)
|
ISS
|
|
|
GO:0050362 [list] [network] L-tryptophan:2-oxoglutarate aminotransferase activity
|
(5 genes)
|
ISS
|
|
|
GO:0016846 [list] [network] carbon-sulfur lyase activity
|
(33 genes)
|
IEA
|
|
|
| KEGG |
ath00380 [list] [network] Tryptophan metabolism (60 genes) |
 |
| Protein |
NP_567706.1
NP_974608.1
|
| BLAST |
NP_567706.1
NP_974608.1
|
| Orthologous |
[Ortholog page]
TAR1 (ath)
TAA1 (ath)
LOC4325198 (osa)
LOC4337930 (osa)
LOC7456901 (ppo)
LOC7492386 (ppo)
LOC11410630 (mtr)
LOC11415573 (mtr)
LOC11439449 (mtr)
LOC25493735 (mtr)
LOC100193435 (zma)
LOC100245885 (vvi)
LOC100257504 (vvi)
LOC100262049 (vvi)
LOC100272716 (zma)
LOC100285505 (zma)
LOC100777098 (gma)
LOC100801447 (gma)
LOC100803246 (gma)
LOC100807013 (gma)
LOC100818522 (gma)
LOC100820582 (gma)
TAA1 (sly)
LOC101253797 (sly)
LOC101262607 (sly)
LOC103634861 (zma)
LOC103649700 (zma)
LOC103831591 (bra)
LOC103840774 (bra)
LOC103840776 (bra)
LOC103852664 (bra)
LOC103862382 (bra)
|
Subcellular
localization
wolf |
|
vacu 4,
chlo 3,
extr 1,
chlo_mito 1
|
(predict for NP_567706.1)
|
|
vacu 4,
chlo 3,
extr 1,
chlo_mito 1
|
(predict for NP_974608.1)
|
|
Subcellular
localization
TargetP |
|
scret 6
|
(predict for NP_567706.1)
|
|
scret 6
|
(predict for NP_974608.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04075 |
Plant hormone signal transduction |
3 |
 |
| ath00564 |
Glycerophospholipid metabolism |
2 |
 |
| ath00940 |
Phenylpropanoid biosynthesis |
2 |
 |
Genes directly connected with TAR2 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 5.5 |
AMP1 |
Peptidase M28 family protein |
[detail] |
824637 |
| 4.9 |
AT1G73600 |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
[detail] |
843694 |
| 4.8 |
AT4G12980 |
Auxin-responsive family protein |
[detail] |
826910 |
|
Coexpressed
gene list |
[Coexpressed gene list for TAR2]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
254125_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
254125_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
254125_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT4G24670 Gene
