ATTED-II : GeneID search result

[←][→] ath AT4G27910 Gene

functional annotation

Function

SET domain protein 16

GO BP

GO:0051571 [list] [network] positive regulation of histone H3-K4 methylation

(5 genes)

IGI

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IEA ISM

GO MF

GO:0018024 [list] [network] histone-lysine N-methyltransferase activity	(39 genes)	IEA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_194520.3

BLAST

NP_194520.3

Orthologous

[Ortholog page] SDG14 (ath) SDG29 (ath) LOC4324177 (osa) LOC4324588 (osa) LOC11434637 (mtr) LOC11446453 (mtr) LOC25499728 (mtr) LOC25500701 (mtr) LOC100246631 (vvi) LOC100246975 (vvi) LOC100383419 (zma) LOC100775276 (gma) LOC100785063 (gma) LOC100793624 (gma) LOC100797346 (gma) LOC100808761 (gma) LOC100811337 (gma) LOC100811960 (gma) LOC101248623 (sly) LOC101251759 (sly) LOC103649567 (zma) LOC103830321 (bra) LOC103834358 (bra) LOC103844819 (bra)

Subcellular
localization
wolf

nucl 6, chlo 2, mito 1

(predict for NP_194520.3)

Subcellular
localization
TargetP

other 8, mito 3

(predict for NP_194520.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with SDG16 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.3	DUO3	Homeodomain-like superfamily protein	[detail]	842765
5.2	AT1G04210	Leucine-rich repeat protein kinase family protein	[detail]	839441
5.2	ATX2	trithorax-like protein 2	[detail]	837093

Coexpressed
gene list

[Coexpressed gene list for SDG16]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253843_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253843_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253843_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828904
Refseq ID (protein)	NP_194520.3

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