[←][→] ath   AT4G28470 Gene
functional annotation
Function   26S proteasome regulatory subunit S2 1B  
GO BP
GO:0042176 [list] [network] regulation of protein catabolic process  (58 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (188 genes)  IBA  
GO:0030163 [list] [network] protein catabolic process  (603 genes)  TAS  
GO CC
GO:0034515 [list] [network] proteasome storage granule  (5 genes)  IBA  
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (15 genes)  IBA TAS  
GO:0000502 [list] [network] proteasome complex  (80 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0004175 [list] [network] endopeptidase activity  (308 genes)  IBA  
GO:0030234 [list] [network] enzyme regulator activity  (427 genes)  IEA  
KEGG ath03050 [list] [network] Proteasome (60 genes)
Protein NP_194576.5 
BLAST NP_194576.5 
Orthologous [Ortholog page] RPN1A (ath)  LOC4328287 (osa)  LOC4341960 (osa)  LOC4346741 (osa)  LOC7469564 (ppo)  LOC11445486 (mtr)  LOC100255701 (vvi)  LOC100384330 (zma)  LOC100777078 (gma)  LOC100799779 (gma)  LOC101252199 (sly)  LOC103654920 (zma)  LOC103828246 (bra)  LOC103854417 (bra)  LOC103861833 (bra) 
Subcellular
localization
wolf
plas 9,  nucl 1,  E.R. 1  (predict for NP_194576.5)
Subcellular
localization
TargetP
other 8  (predict for NP_194576.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with RPN1B on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.7 AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit [detail] 817833
10.2 RPN1A 26S proteasome regulatory subunit S2 1A [detail] 816580
8.3 MIRO1 MIRO-related GTP-ase 1 [detail] 832814
8.2 CAND1 cullin-associated and neddylation dissociated [detail] 814786
Coexpressed
gene list		 [Coexpressed gene list for RPN1B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253797_at
253797_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253797_at
253797_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253797_at
253797_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828964      
Refseq ID (protein) NP_194576.5 


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