[←][→] ath   AT4G32850 Gene
functional annotation
Function   nuclear poly(a) polymerase  
GO BP
GO:0006378 [list] [network] mRNA polyadenylation  (20 genes)  IBA  
GO:0043631 [list] [network] RNA polyadenylation  (21 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0004652 [list] [network] polynucleotide adenylyltransferase activity  (6 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001031778.1  NP_001031779.1  NP_001119102.1  NP_001119103.1  NP_001329663.1  NP_001329664.1  NP_001329665.1  NP_001329666.1  NP_001329667.1  NP_001329668.1  NP_001329669.1  NP_195011.4  NP_849561.1  NP_849562.2  NP_974668.1  NP_974669.1  NP_974670.2 
BLAST NP_001031778.1  NP_001031779.1  NP_001119102.1  NP_001119103.1  NP_001329663.1  NP_001329664.1  NP_001329665.1  NP_001329666.1  NP_001329667.1  NP_001329668.1  NP_001329669.1  NP_195011.4  NP_849561.1  NP_849562.2  NP_974668.1  NP_974669.1  NP_974670.2 
Orthologous [Ortholog page] PAPS2 (ath)  LOC4328790 (osa)  LOC7462286 (ppo)  LOC7463733 (ppo)  LOC9268632 (osa)  LOC25490147 (mtr)  LOC100263460 (vvi)  LOC100278989 (zma)  LOC100280371 (zma)  LOC100382126 (zma)  LOC100783237 (gma)  LOC100798218 (gma)  LOC100802620 (gma)  LOC100819294 (gma)  LOC101247241 (sly)  LOC101268462 (sly)  LOC103850374 (bra)  LOC103864694 (bra) 
Subcellular
localization
wolf
nucl 9,  chlo 1,  pero 1  (predict for NP_001031778.1)
nucl 9,  chlo 1,  pero 1  (predict for NP_001031779.1)
nucl 9  (predict for NP_001119102.1)
nucl 9,  chlo 1,  pero 1  (predict for NP_001119103.1)
nucl 9,  chlo 1,  pero 1  (predict for NP_001329663.1)
nucl 9,  chlo 1,  pero 1  (predict for NP_001329664.1)
nucl 9,  chlo 1,  pero 1  (predict for NP_001329665.1)
nucl 9,  chlo 1,  pero 1  (predict for NP_001329666.1)
nucl 9,  chlo 1,  pero 1  (predict for NP_001329667.1)
nucl 9,  chlo 1,  pero 1  (predict for NP_001329668.1)
nucl 9,  chlo 1,  pero 1  (predict for NP_001329669.1)
nucl 9  (predict for NP_195011.4)
nucl 9  (predict for NP_849561.1)
nucl 9  (predict for NP_849562.2)
nucl 9,  chlo 1,  pero 1  (predict for NP_974668.1)
nucl 9  (predict for NP_974669.1)
nucl 9  (predict for NP_974670.2)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001031778.1)
other 4,  mito 3  (predict for NP_001031779.1)
other 4,  mito 3  (predict for NP_001119102.1)
other 4,  mito 3  (predict for NP_001119103.1)
other 4,  mito 3  (predict for NP_001329663.1)
other 4,  mito 3  (predict for NP_001329664.1)
other 4,  mito 3  (predict for NP_001329665.1)
other 4,  mito 3  (predict for NP_001329666.1)
other 4,  mito 3  (predict for NP_001329667.1)
other 4,  mito 3  (predict for NP_001329668.1)
other 4,  mito 3  (predict for NP_001329669.1)
other 4,  mito 3  (predict for NP_195011.4)
other 4,  mito 3  (predict for NP_849561.1)
other 4,  mito 3  (predict for NP_849562.2)
other 4,  mito 3  (predict for NP_974668.1)
other 4,  mito 3  (predict for NP_974669.1)
other 4,  mito 3  (predict for NP_974670.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 2
Genes directly connected with nPAP on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.3 PAPS2 poly(A) polymerase 2 [detail] 817127
7.4 AT1G26580 ELM2 domain protein [detail] 839198
6.4 AT2G42330 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein [detail] 818834
Coexpressed
gene list		 [Coexpressed gene list for nPAP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253399_at
253399_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253399_at
253399_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253399_at
253399_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829421      
Refseq ID (protein) NP_001031778.1 
NP_001031779.1 
NP_001119102.1 
NP_001119103.1 
NP_001329663.1 
NP_001329664.1 
NP_001329665.1 
NP_001329666.1 
NP_001329667.1 
NP_001329668.1 
NP_001329669.1 
NP_195011.4 
NP_849561.1 
NP_849562.2 
NP_974668.1 
NP_974669.1 
NP_974670.2 


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