[←][→] ath   AT4G35800 Gene
functional annotation
Function   RNA polymerase II large subunit  
GO BP
GO:0006366 [list] [network] transcription by RNA polymerase II  (57 genes)  IEA  
GO CC
GO:0005665 [list] [network] RNA polymerase II, core complex  (22 genes)  IBA IDA IPI  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0001055 [list] [network] RNA polymerase II activity  (19 genes)  IBA  
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  IBA ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03020 [list] [network] RNA polymerase (45 genes)
Protein NP_001329346.1  NP_195305.2 
BLAST NP_001329346.1  NP_195305.2 
Orthologous [Ortholog page] LOC541967 (zma)  LOC778257 (sly)  LOC4337831 (osa)  LOC9267835 (osa)  LOC11434004 (mtr)  LOC100264310 (vvi)  LOC100804975 (gma)  LOC100812506 (gma)  LOC103834927 (bra)  LOC103873389 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto 1,  mito 1,  cysk 1  (predict for NP_001329346.1)
nucl 8,  cyto 1,  mito 1,  cysk 1  (predict for NP_195305.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001329346.1)
other 6  (predict for NP_195305.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with NRPB1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.2 AT3G50370 hypothetical protein [detail] 824199
12.1 HUA2 Tudor/PWWP/MBT domain-containing protein [detail] 832379
11.9 KAK HECT ubiquitin protein ligase family protein KAK [detail] 830017
10.7 LBA1 RNA helicase [detail] 834747
10.0 AT5G51300 splicing factor-like protein [detail] 835204
7.4 AT5G27650 Tudor/PWWP/MBT superfamily protein [detail] 832827
6.4 AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein [detail] 831941
Coexpressed
gene list		 [Coexpressed gene list for NRPB1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253133_at
253133_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253133_at
253133_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253133_at
253133_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829734      
Refseq ID (protein) NP_001329346.1 
NP_195305.2 


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