[←][→] ath   AT5G05560 Gene
functional annotation
Function   E3 ubiquitin ligase  
GO BP
GO:0007091 [list] [network] metaphase/anaphase transition of mitotic cell cycle  (1 genes)  IBA  
GO:0070979 [list] [network] protein K11-linked ubiquitination  (4 genes)  IBA  
GO:0031145 [list] [network] anaphase-promoting complex-dependent catabolic process  (6 genes)  IBA  
GO:0010252 [list] [network] auxin homeostasis  (35 genes)  IMP  
GO:0048481 [list] [network] plant ovule development  (57 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (146 genes)  IMP  
GO:0051301 [list] [network] cell division  (352 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO CC
GO:0005680 [list] [network] anaphase-promoting complex  (12 genes)  IBA  
GO:0000151 [list] [network] ubiquitin ligase complex  (277 genes)  TAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001318485.1  NP_001331419.1  NP_001331420.1 
BLAST NP_001318485.1  NP_001331419.1  NP_001331420.1 
Orthologous [Ortholog page] LOC4338511 (osa)  LOC7494508 (ppo)  LOC11424985 (mtr)  LOC100241661 (vvi)  LOC100778607 (gma)  LOC100818647 (gma)  LOC101245767 (sly)  LOC103631492 (zma)  LOC103850589 (bra)  LOC103855632 (bra) 
Subcellular
localization
wolf
plas 9,  E.R. 1  (predict for NP_001318485.1)
plas 9,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001331419.1)
plas 9,  E.R. 1,  golg 1  (predict for NP_001331420.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_001318485.1)
other 7,  mito 4  (predict for NP_001331419.1)
chlo 4  (predict for NP_001331420.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with EMB2771 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 SECA2 Preprotein translocase SecA family protein [detail] 838767
8.7 ILA ILITYHIA [detail] 842787
8.6 EMB2788 ribosome 60S biogenesis amino-terminal protein [detail] 828809
8.2 AT3G49725 GTP-binding protein, HflX [detail] 7922380
6.1 AT5G24970 Protein kinase superfamily protein [detail] 832567
Coexpressed
gene list		 [Coexpressed gene list for EMB2771]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250787_at
250787_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250787_at
250787_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250787_at
250787_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830439      
Refseq ID (protein) NP_001318485.1 
NP_001331419.1 
NP_001331420.1 


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