[←][→] ath   AT5G08300 Gene
functional annotation
Function   Succinyl-CoA ligase, alpha subunit  
GO BP
GO:0006105 [list] [network] succinate metabolic process  (2 genes)  IBA  
GO:0006104 [list] [network] succinyl-CoA metabolic process  (3 genes)  IBA  
GO:0009142 [list] [network] nucleoside triphosphate biosynthetic process  (42 genes)  IBA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (54 genes)  IBA IEA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO CC
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA IDA ISM  
GO MF
GO:0004775 [list] [network] succinate-CoA ligase (ADP-forming) activity  (2 genes)  IBA  
GO:0004550 [list] [network] nucleoside diphosphate kinase activity  (6 genes)  IBA  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IDA  
GO:0048037 [list] [network] cofactor binding  (955 genes)  IEA  
GO:0000166 [list] [network] nucleotide binding  (2618 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IDA  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (63 genes)
ath00640 [list] [network] Propanoate metabolism (43 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_196447.1 
BLAST NP_196447.1 
Orthologous [Ortholog page] SCOA (sly)  LOC543943 (sly)  AT5G23250 (ath)  LOC4343710 (osa)  LOC11414653 (mtr)  LOC100216609 (zma)  LOC100261358 (vvi)  LOC100261494 (vvi)  LOC100283329 (zma)  LOC100782001 (gma)  LOC100815484 (gma)  LOC103847149 (bra)  LOC103850689 (bra)  LOC103855774 (bra)  LOC103860515 (bra) 
Subcellular
localization
wolf
mito 5,  chlo_mito 5,  chlo 4  (predict for NP_196447.1)
Subcellular
localization
TargetP
chlo 7,  mito 6  (predict for NP_196447.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 12
ath00020 Citrate cycle (TCA cycle) 11
ath01230 Biosynthesis of amino acids 5
ath01210 2-Oxocarboxylic acid metabolism 4
ath00190 Oxidative phosphorylation 4
Genes directly connected with AT5G08300 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.0 AT2G20420 ATP citrate lyase (ACL) family protein [detail] 816561
10.8 IDH1 isocitrate dehydrogenase 1 [detail] 829679
8.9 CYTC-1 CYTOCHROME C-1 [detail] 838889
8.6 AT3G55410 2-oxoglutarate dehydrogenase, E1 component [detail] 824707
8.6 AT4G26910 Dihydrolipoamide succinyltransferase [detail] 828798
8.5 IDH-VI isocitrate dehydrogenase VI [detail] 820139
8.4 FUM1 fumarase 1 [detail] 819364
7.0 AT5G55610 isopentenyl-diphosphate delta-isomerase [detail] 835655
7.0 COX10 cytochrome c oxidase 10 [detail] 819059
Coexpressed
gene list		 [Coexpressed gene list for AT5G08300]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246035_at
246035_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246035_at
246035_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246035_at
246035_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830726      
Refseq ID (protein) NP_196447.1 


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