[←][→] ath   At5g08300 Gene
functional annotation
Function   Succinyl-CoA ligase, alpha subunit  
GO BP
GO:0006099 [list] [network] tricarboxylic acid cycle  (22 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA ISM  
GO MF
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
GO:0046872 [list] [network] metal ion binding  (1000 genes)  IDA  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (64 genes)
ath00640 [list] [network] Propanoate metabolism (41 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_196447.1 
BLAST NP_196447.1 
Orthologous [Ortholog page] SCOA (sly)  LOC543943 (sly)  AT5G23250 (ath)  LOC4343710 (osa)  LOC7454042 (ppo)  LOC7486370 (ppo)  LOC11414653 (mtr)  LOC18103612 (ppo)  LOC100782001 (gma)  LOC100815484 (gma)  LOC103847149 (bra)  LOC103850689 (bra)  LOC103855774 (bra)  LOC103860515 (bra)  LOC123044441 (tae)  LOC123052304 (tae)  LOC123188104 (tae)  LOC123425576 (hvu) 
Subcellular
localization
wolf
mito 5,  chlo_mito 5,  chlo 4  (predict for NP_196447.1)
Subcellular
localization
TargetP
chlo 7,  mito 6  (predict for NP_196447.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 12
ath00020 Citrate cycle (TCA cycle) 11
ath00620 Pyruvate metabolism 4
ath01230 Biosynthesis of amino acids 4
ath00190 Oxidative phosphorylation 4
Genes directly connected with AT5G08300 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.1 IDH1 isocitrate dehydrogenase 1 [detail] 829679
10.7 AT2G20420 ATP citrate lyase (ACL) family protein [detail] 816561
9.8 MPPBETA Insulinase (Peptidase family M16) protein [detail] 821084
9.1 AT4G26910 Dihydrolipoamide succinyltransferase [detail] 828798
8.9 AT3G55410 2-oxoglutarate dehydrogenase, E1 component [detail] 824707
8.7 IDH-VI isocitrate dehydrogenase VI [detail] 820139
8.6 AT5G55070 Dihydrolipoamide succinyltransferase [detail] 835598
8.0 FUM1 fumarase 1 [detail] 819364
7.4 COX10 cytochrome c oxidase 10 [detail] 819059
7.1 PUMP1 plant uncoupling mitochondrial protein 1 [detail] 824578
7.1 NTRA NADPH-dependent thioredoxin reductase A [detail] 816248
6.7 AT5G63680 Pyruvate kinase family protein [detail] 836488
Coexpressed
gene list		 [Coexpressed gene list for AT5G08300]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246035_at
246035_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246035_at
246035_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246035_at
246035_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830726      
Refseq ID (protein) NP_196447.1 


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