[←][→] ath   At5g08565 Gene
functional annotation
Function   Transcription initiation Spt4-like protein      
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
KEGG ath03250 [list] [network] Viral life cycle - HIV-1 (39 genes)
Protein NP_001190264.1  NP_568201.1 
BLAST NP_001190264.1  NP_568201.1 
Orthologous [Ortholog page] SPT42 (ath)  LOC4343956 (osa)  LOC7454302 (ppo)  LOC11430820 (mtr)  LOC11444230 (mtr)  LOC100306659 (gma)  LOC100812057 (gma)  LOC101248963 (sly)  LOC103855061 (bra)  LOC103855801 (bra)  LOC123044151 (tae)  LOC123052028 (tae)  LOC123187897 (tae)  LOC123425238 (hvu) 
Subcellular
localization
wolf
cyto 4,  extr 3,  chlo 2,  cyto_nucl 2,  cyto_plas 2  (predict for NP_001190264.1)
cyto 3,  nucl 2,  chlo 1,  mito 1,  extr 1,  chlo_mito 1,  nucl_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_568201.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for NP_001190264.1)
other 5,  mito 3  (predict for NP_568201.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
Genes directly connected with AT5G08565 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
4.7 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 818456
4.4 AT3G60480 StAR lipid transfer-like protein [detail] 825219
4.1 AT3G02190 Ribosomal protein L39 family protein [detail] 820350
Coexpressed
gene list		 [Coexpressed gene list for AT5G08565]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250537_at
250537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250537_at
250537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250537_at
250537_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830757      
Refseq ID (protein) NP_001190264.1 
NP_568201.1 


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