ATTED-II : GeneID search result

[←][→] ath At5g10140 Gene

functional annotation

Function

K-box region and MADS-box transcription factor family protein

GO BP

GO:0010048 [list] [network] vernalization response	(18 genes)	IEP
GO:0009910 [list] [network] negative regulation of flower development	(55 genes)	IMP
GO:0042752 [list] [network] regulation of circadian rhythm	(61 genes)	IMP
GO:2000028 [list] [network] regulation of photoperiodism, flowering	(94 genes)	IMP
GO:0009266 [list] [network] response to temperature stimulus	(843 genes)	IDA IMP

GO CC

GO:0032991 [list] [network] protein-containing complex	(1500 genes)	IDA
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding	(708 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1576 genes)	IDA ISS TAS
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_001078563.1 NP_001154703.1 NP_001190272.1 NP_196576.1

BLAST

NP_001078563.1 NP_001154703.1 NP_001190272.1 NP_196576.1

Orthologous

[Ortholog page] AGL31 (ath) MAF3 (ath) MAF4 (ath) MAF5 (ath) MAF1 (ath) LOC7456243 (ppo) LOC7460555 (ppo) LOC7481216 (ppo) LOC18097112 (ppo) LOC18097114 (ppo) LOC18097117 (ppo) AGL3L (gma) LOC100804540 (gma) MBP15 (sly) LOC101247413 (sly) LOC101250404 (sly) FLC1 (bra) LOC103850339 (bra) LOC103855272 (bra) LOC103855273 (bra) LOC103855275 (bra) LOC103855854 (bra) LOC103857284 (bra) LOC103873930 (bra) LOC103873932 (bra)

Subcellular
localization
wolf

chlo 3, mito 3, chlo_mito 3, nucl 2	(predict for NP_001078563.1)
chlo 3, mito 3, chlo_mito 3, nucl 1, E.R. 1, cyto_mito 1	(predict for NP_001154703.1)
chlo 3, mito 2, E.R. 2, nucl 1, E.R._vacu 1, E.R._plas 1, mito_plas 1	(predict for NP_001190272.1)
chlo 3, mito 3, chlo_mito 3, nucl 2	(predict for NP_196576.1)

Subcellular
localization
TargetP

other 6	(predict for NP_001078563.1)
other 6	(predict for NP_001154703.1)
other 6	(predict for NP_001190272.1)
other 6	(predict for NP_196576.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for FLC]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250476_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250476_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250476_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	830878
Refseq ID (protein)	NP_001078563.1
	NP_001154703.1
	NP_001190272.1
	NP_196576.1

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