[←][→] ath   At5g11170 Gene
functional annotation
Function   DEAD/DEAH box RNA helicase family protein      
GO BP
GO:0046686 [list] [network] response to cadmium ion  (90 genes)  IEP  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003725 [list] [network] double-stranded RNA binding  (13 genes)  IDA  
GO:0003697 [list] [network] single-stranded DNA binding  (37 genes)  IDA  
GO:0003724 [list] [network] RNA helicase activity  (45 genes)  IDA  
GO:0003727 [list] [network] single-stranded RNA binding  (55 genes)  IDA  
GO:0016887 [list] [network] ATP hydrolysis activity  (115 genes)  IDA  
GO:0003690 [list] [network] double-stranded DNA binding  (789 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03013 [list] [network] Nucleocytoplasmic transport (103 genes)
ath03015 [list] [network] mRNA surveillance pathway (119 genes)
ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001318536.1  NP_568244.2 
BLAST NP_001318536.1  NP_568244.2 
Orthologous [Ortholog page] UAP56b (ath)  AIP1 (osa)  AIP2 (osa)  LOC7462984 (ppo)  LOC7468631 (ppo)  LOC11424505 (mtr)  LOC11431965 (mtr)  LOC25491302 (mtr)  LOC100785358 (gma)  LOC100796232 (gma)  LOC100799082 (gma)  LOC100808957 (gma)  LOC101259772 (sly)  LOC101261336 (sly)  LOC103846744 (bra)  LOC103846746 (bra)  LOC103850757 (bra)  LOC103850759 (bra)  LOC103855903 (bra)  LOC123061264 (tae)  LOC123069793 (tae)  LOC123071061 (tae)  LOC123078347 (tae)  LOC123149969 (tae)  LOC123183423 (tae)  LOC123183424 (tae)  LOC123443683 (hvu)  LOC123452774 (hvu) 
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for NP_001318536.1)
cyto 6,  nucl 2,  extr 1,  cysk_nucl 1  (predict for NP_568244.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001318536.1)
other 9  (predict for NP_568244.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath00970 Aminoacyl-tRNA biosynthesis 3
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with UAP56a on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.0 UAP56b DEAD/DEAH box RNA helicase family protein [detail] 830990
7.5 AT2G47250 RNA helicase family protein [detail] 819338
6.9 AT3G62310 RNA helicase family protein [detail] 825404
Coexpressed
gene list		 [Coexpressed gene list for UAP56a]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 830986      
Refseq ID (protein) NP_001318536.1 
NP_568244.2 


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