ATTED-II : GeneID search result

[←][→] ath At5g37900 Gene

functional annotation

Function

TRAF-like superfamily protein

GO BP

GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process	(230 genes)	IEA
GO:0016567 [list] [network] protein ubiquitination	(434 genes)	IEA

GO CC

GO:0005886 [list] [network] plasma membrane	(2529 genes)	HDA
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(13880 genes)	IEA

GO MF

GO:0008270 [list] [network] zinc ion binding

(429 genes)

IEA

KEGG

ath04120 [list] [network] Ubiquitin mediated proteolysis (155 genes)

Protein

NP_198606.1

BLAST

NP_198606.1

Orthologous

[Ortholog page] AT5G37870 (ath) AT5G37890 (ath) AT5G37910 (ath) AT5G37930 (ath) AT5G62800 (ath) AT1G66610 (ath) AT1G66620 (ath) AT1G66630 (ath) AT1G66650 (ath) AT1G66660 (ath) LOC4340862 (osa) LOC7493536 (ppo) LOC7494532 (ppo) LOC9269391 (osa) LOC11418747 (mtr) LOC11425847 (mtr) LOC11432566 (mtr) LOC11436875 (mtr) LOC11437704 (mtr) LOC11445862 (mtr) LOC18099412 (ppo) LOC18106453 (ppo) LOC25483069 (mtr) LOC25483070 (mtr) LOC25493350 (mtr) LOC25499082 (mtr) LOC100778869 (gma) LOC100797881 (gma) LOC101256260 (sly) LOC101256849 (sly) LOC101262084 (sly) LOC101262896 (sly) LOC102662420 (gma) LOC103829298 (bra) LOC103831113 (bra) LOC103831115 (bra) LOC103841498 (bra) LOC103850097 (bra) LOC103857391 (bra) LOC103860069 (bra) LOC103863762 (bra) LOC103864155 (bra) LOC103864598 (bra) LOC103867898 (bra) LOC103872071 (bra) LOC104646203 (sly) LOC107275945 (osa) LOC107276150 (osa) LOC107276602 (osa) LOC107278743 (osa) LOC109119263 (sly) LOC109119702 (sly) LOC112937424 (osa) LOC120578306 (mtr) LOC120580680 (mtr) LOC120580681 (mtr) LOC123039382 (tae) LOC123056627 (tae) LOC123056632 (tae) LOC123056639 (tae) LOC123056700 (tae) LOC123056701 (tae) LOC123056703 (tae) LOC123057602 (tae) LOC123057689 (tae) LOC123059891 (tae) LOC123059895 (tae) LOC123059896 (tae) LOC123064409 (tae) LOC123064410 (tae) LOC123064418 (tae) LOC123064420 (tae) LOC123064421 (tae) LOC123064437 (tae) LOC123064439 (tae) LOC123064533 (tae) LOC123064536 (tae) LOC123064540 (tae) LOC123064565 (tae) LOC123064567 (tae) LOC123064568 (tae) LOC123064573 (tae) LOC123064574 (tae) LOC123067172 (tae) LOC123067176 (tae) LOC123067177 (tae) LOC123067213 (tae) LOC123068397 (tae) LOC123073721 (tae) LOC123073723 (tae) LOC123073727 (tae) LOC123073728 (tae) LOC123073734 (tae) LOC123073737 (tae) LOC123076027 (tae) LOC123076029 (tae) LOC123076620 (tae) LOC123076854 (tae) LOC123076856 (tae) LOC123076860 (tae) LOC123093866 (tae) LOC123099091 (tae) LOC123106050 (tae) LOC123107107 (tae) LOC123164648 (tae) LOC123177068 (tae) LOC123177102 (tae) LOC123177454 (tae) LOC123396121 (hvu) LOC123439208 (hvu) LOC123439211 (hvu) LOC123439215 (hvu) LOC123441287 (hvu) LOC123441292 (hvu) LOC123441293 (hvu) LOC123441295 (hvu) LOC123441302 (hvu) LOC123449949 (hvu) LOC123450607 (hvu)

Subcellular
localization
wolf

nucl 7, cyto 1, chlo 1, extr 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for NP_198606.1)

Subcellular
localization
TargetP

other 4, mito 3

(predict for NP_198606.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT5G37900]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249593_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249593_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249593_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	833769
Refseq ID (protein)	NP_198606.1

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