[][] ath   At5g38520 Gene
functional annotation
Function   alpha/beta-Hydrolases superfamily protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0015994 [list] [network] chlorophyll metabolic process  (122 genes)  IMP  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA IDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0047746 [list] [network] chlorophyllase activity  (3 genes)  IDA  
KEGG
Protein NP_001078682.1  NP_198668.1 
BLAST NP_001078682.1  NP_198668.1 
Orthologous [Ortholog page] LOC4338815 (osa)LOC18108369 (ppo)LOC25484504 (mtr)LOC100775473 (gma)LOC101247687 (sly)LOC103850117 (bra)LOC123056208 (tae)LOC123133595 (tae)LOC123159277 (tae)LOC123412844 (hvu)
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_001078682.1)
chlo 8,  mito 1  (predict for NP_198668.1)
Subcellular
localization
TargetP
chlo 8,  mito 6  (predict for NP_001078682.1)
chlo 8,  mito 6  (predict for NP_198668.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 9
ath00710 Carbon fixation in photosynthetic organisms 8
ath00010 Glycolysis / Gluconeogenesis 3
ath00030 Pentose phosphate pathway 3
ath00051 Fructose and mannose metabolism 3
Genes directly connected with AT5G38520 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.0 ZKT protein containing PDZ domain, a K-box domain, and a TPR region [detail] 841995
8.8 NPQ4 Chlorophyll A-B binding family protein [detail] 841033
8.8 Lhca5 photosystem I light harvesting complex protein 5 [detail] 841099
Coexpressed
gene list
[Coexpressed gene list for AT5G38520]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249524_at
249524_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249524_at
249524_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
249524_at
249524_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 833840    
Refseq ID (protein) NP_001078682.1 
NP_198668.1 


The preparation time of this page was 0.1 [sec].