[←][→] ath   AT5G41340 Gene
functional annotation
Function   ubiquitin conjugating enzyme 4  
GO BP
GO:0009408 [list] [network] response to heat  (229 genes)  IDA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA IDA TAS  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (37 genes)  IBA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA ISS  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001331159.1  NP_568589.1 
BLAST NP_001331159.1  NP_568589.1 
Orthologous [Ortholog page] UBC4 (gma)  UBC5 (ath)  LOC4348755 (osa)  LOC7457348 (ppo)  LOC7457718 (ppo)  LOC7472757 (ppo)  LOC7496982 (ppo)  LOC11407971 (mtr)  LOC25500869 (mtr)  LOC25502069 (mtr)  LOC100194405 (zma)  LOC100244806 (vvi)  LOC100250088 (vvi)  LOC100253472 (vvi)  LOC100527526 (gma)  LOC100527756 (gma)  LOC100790685 (gma)  LOC100791133 (gma)  LOC100804969 (gma)  LOC100805356 (gma)  LOC100812138 (gma)  LOC100857003 (zma)  LOC101202716 (zma)  LOC101253514 (sly)  LOC101254242 (sly)  LOC101261295 (sly)  LOC101265863 (sly)  LOC103850216 (bra)  LOC103864075 (bra)  LOC115565779 (zma) 
Subcellular
localization
wolf
nucl 7,  chlo 2  (predict for NP_001331159.1)
nucl 7,  cyto 2  (predict for NP_568589.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001331159.1)
other 8  (predict for NP_568589.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 4
ath00190 Oxidative phosphorylation 2
Genes directly connected with UBC4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 AT4G15930 Dynein light chain type 1 family protein [detail] 827275
6.3 UBC5 ubiquitin-conjugating enzyme 5 [detail] 842683
5.5 UBC6 ubiquitin-conjugating enzyme 6 [detail] 819211
5.4 ATFP8 Ras-related small GTP-binding family protein [detail] 820345
Coexpressed
gene list		 [Coexpressed gene list for UBC4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249299_at
249299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249299_at
249299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249299_at
249299_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834136      
Refseq ID (protein) NP_001331159.1 
NP_568589.1 


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