[←][→] ath   AT5G42950 Gene
functional annotation
Function   GYF domain-containing protein  
GO BP
GO:0051607 [list] [network] defense response to virus  (44 genes)  IMP  
GO:0012501 [list] [network] programmed cell death  (106 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (260 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IDA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG
Protein NP_199109.1 
BLAST NP_199109.1 
Orthologous [Ortholog page] LOC4342361 (osa)  LOC7461515 (ppo)  LOC25482125 (mtr)  LOC100262487 (vvi)  LOC100797445 (gma)  LOC100805646 (gma)  LOC100813188 (gma)  LOC100815978 (gma)  LOC101267523 (sly)  LOC103631932 (zma)  LOC103644098 (zma)  LOC103839265 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_199109.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_199109.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT5G42950 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.3 MOS1 modifier of snc1 [detail] 828570
9.9 AT3G50370 hypothetical protein [detail] 824199
9.5 SWP RNA polymerase II transcription mediator [detail] 819634
9.1 AT5G64270 splicing factor [detail] 836548
7.9 AT3G59020 ARM repeat superfamily protein [detail] 825071
5.9 AT1G29350 RNA polymerase II degradation factor-like protein (DUF1296) [detail] 839809
Coexpressed
gene list		 [Coexpressed gene list for AT5G42950]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249172_at
249172_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249172_at
249172_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249172_at
249172_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834307      
Refseq ID (protein) NP_199109.1 


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