ATTED-II : GeneID search result

[←][→] ath AT5G44400 Gene

functional annotation

Function

FAD-binding Berberine family protein

GO BP

GO:0055114 [list] [network] oxidation-reduction process

(1468 genes)

IEA

GO CC

GO:0005618 [list] [network] cell wall	(685 genes)	IDA
GO:0009506 [list] [network] plasmodesma	(962 genes)	IDA
GO:0005576 [list] [network] extracellular region	(3363 genes)	IEA
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM

GO MF

GO:0071949 [list] [network] FAD binding	(68 genes)	IEA
GO:0016491 [list] [network] oxidoreductase activity	(1435 genes)	IEA

KEGG

Protein

NP_199253.1

BLAST

NP_199253.1

Orthologous

[Ortholog page] LOC732592 (gma) LOC732593 (gma) MEE23 (ath) AT4G20820 (ath) AT4G20860 (ath) AT5G44360 (ath) AT5G44380 (ath) AT5G44390 (ath) AT5G44410 (ath) AT5G44440 (ath) AT1G30700 (ath) AT1G30760 (ath) LOC4341253 (osa) LOC4341257 (osa) LOC4341258 (osa) LOC4341259 (osa) LOC4341261 (osa) LOC7457662 (ppo) LOC7471681 (ppo) LOC7480403 (ppo) LOC7480408 (ppo) LOC7480409 (ppo) LOC7480410 (ppo) LOC7485160 (ppo) LOC7485161 (ppo) LOC7489112 (ppo) LOC7489114 (ppo) LOC7489116 (ppo) LOC7489117 (ppo) LOC11406991 (mtr) LOC11415235 (mtr) LOC11415951 (mtr) LOC11416804 (mtr) LOC11422032 (mtr) LOC11422989 (mtr) LOC25486316 (mtr) LOC25486318 (mtr) LOC25486319 (mtr) LOC25493334 (mtr) LOC25493352 (mtr) LOC25493353 (mtr) LOC25493354 (mtr) LOC25493355 (mtr) LOC25493356 (mtr) LOC25493357 (mtr) LOC25493365 (mtr) LOC25493366 (mtr) LOC100242277 (vvi) LOC100243731 (vvi) LOC100245584 (vvi) LOC100247412 (vvi) LOC100248870 (vvi) LOC100250740 (vvi) LOC100252519 (vvi) LOC100253961 (vvi) LOC100255905 (vvi) LOC100266314 (vvi) LOC100267923 (vvi) LOC100276794 (zma) LOC100282250 (zma) LOC100775353 (gma) LOC100777594 (gma) LOC100778568 (gma) LOC100779395 (gma) LOC100780114 (gma) LOC100780461 (gma) LOC100781004 (gma) LOC100782093 (gma) LOC100782292 (gma) LOC100782631 (gma) LOC100786800 (gma) LOC100794074 (gma) LOC100796276 (gma) LOC100799990 (gma) LOC100800519 (gma) LOC100801058 (gma) LOC100802131 (gma) LOC100803041 (gma) LOC100810481 (gma) LOC100811019 (gma) LOC100811558 (gma) LOC100812087 (gma) LOC100813706 (gma) LOC101249413 (sly) LOC101249763 (sly) LOC101254601 (sly) LOC101254908 (sly) LOC101254965 (sly) LOC101255262 (sly) LOC101255854 (sly) LOC101256448 (sly) LOC101263376 (sly) LOC101263972 (sly) LOC101264289 (sly) LOC101265606 (sly) LOC102662170 (gma) LOC103629835 (zma) LOC103629842 (zma) LOC103638604 (zma) LOC103827902 (bra) LOC103827906 (bra) LOC103828799 (bra) LOC103839175 (bra) LOC103839178 (bra) LOC103839179 (bra) LOC103839182 (bra) LOC103839322 (bra) LOC103840305 (bra) LOC103840313 (bra) LOC103841228 (bra) LOC103858400 (bra) LOC103858430 (bra) LOC103858724 (bra) LOC103867418 (bra) LOC104645788 (sly) LOC104646055 (sly) LOC107275394 (osa)

Subcellular
localization
wolf

chlo 6, vacu 2, nucl 1, E.R. 1

(predict for NP_199253.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_199253.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G44400 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.2	CAD6	cinnamyl alcohol dehydrogenase 6	[detail]	829953
5.2	AT1G68470	Exostosin family protein	[detail]	843176
4.9	AT2G36570	Leucine-rich repeat protein kinase family protein	[detail]	818230

Coexpressed
gene list

[Coexpressed gene list for AT5G44400]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249046_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249046_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249046_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834466
Refseq ID (protein)	NP_199253.1

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