[←][→] ath   At5g48250 Gene
functional annotation
Function   B-box type zinc finger protein with CCT domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009638 [list] [network] phototropism  (30 genes)  IEA  
GO:0048580 [list] [network] regulation of post-embryonic development  (425 genes)  IEA  
GO:0009057 [list] [network] macromolecule catabolic process  (548 genes)  IEA  
GO:0014070 [list] [network] response to organic cyclic compound  (807 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_199636.1 
BLAST NP_199636.1 
Orthologous [Ortholog page] COL9 (ath)  LOC4330574 (osa)  LOC4340812 (osa)  LOC7458244 (ppo)  LOC7469344 (ppo)  LOC11415514 (mtr)  LOC11435974 (mtr)  LOC100783016 (gma)  LOC100787695 (gma)  LOC100796748 (gma)  LOC100800832 (gma)  LOC101250503 (sly)  LOC101257930 (sly)  LOC101267825 (sly)  LOC103249162 (bra)  LOC103849175 (bra)  LOC103854528 (bra)  LOC103859237 (bra)  LOC103874939 (bra)  LOC112326649 (ppo)  LOC123128245 (tae)  LOC123138077 (tae)  LOC123145345 (tae)  LOC123150352 (tae)  LOC123162779 (tae)  LOC123167272 (tae)  LOC123404271 (hvu)  LOC123413031 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_199636.1)
Subcellular
localization
TargetP
other 5  (predict for NP_199636.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
Genes directly connected with BBX8 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.4 COL9 CONSTANS-like 9 [detail] 819956
12.4 AT1G17665 CA-responsive protein [detail] 838343
12.0 COR27 cold regulated protein 27 [detail] 834301
10.0 PCL1 Homeodomain-like superfamily protein [detail] 823817
10.0 PRR5 two-component response regulator-like protein [detail] 832518
9.0 RIBA2 riboflavin biosynthesis protein [detail] 816777
8.8 PRR3 pseudo-response regulator 3 [detail] 836132
8.5 BBX13 B-box type zinc finger protein with CCT domain-containing protein [detail] 839698
8.2 TAG1 membrane bound O-acyl transferase (MBOAT) family protein [detail] 816464
8.2 ABF1 abscisic acid responsive element-binding factor 1 [detail] 841395
8.1 CYCT1;3 cyclin T 1;3 [detail] 839655
7.6 ALDH5F1 aldehyde dehydrogenase 5F1 [detail] 844282
7.2 AT2G16365 F-box family protein [detail] 816133
6.7 AT5G54930 AT hook motif-containing protein [detail] 835584
6.6 PP2-A12 phloem protein 2-A12 [detail] 837826
6.3 PBL1 PBS1-like 1 [detail] 824711
6.2 AT4G33985 membrane insertase, putative (DUF1685) [detail] 829545
5.6 AT4G16146 cAMP-regulated phosphoprotein 19-related protein [detail] 827304
5.2 AIF1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 [detail] 819749
Coexpressed
gene list		 [Coexpressed gene list for BBX8]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248745_at
248745_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248745_at
248745_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248745_at
248745_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834878      
Refseq ID (protein) NP_199636.1 


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