[←][→] ath   AT5G48930 Gene
functional annotation
Function   hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase  
GO BP
GO:0009963 [list] [network] positive regulation of flavonoid biosynthetic process  (10 genes)  IMP  
GO:0010252 [list] [network] auxin homeostasis  (35 genes)  IMP  
GO:0009809 [list] [network] lignin biosynthetic process  (47 genes)  IMP  
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0016020 [list] [network] membrane  (7839 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0047172 [list] [network] shikimate O-hydroxycinnamoyltransferase activity  (1 genes)  IMP  
GO:0047205 [list] [network] quinate O-hydroxycinnamoyltransferase activity  (1 genes)  IMP  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00940 [list] [network] Phenylpropanoid biosynthesis (166 genes)
ath00941 [list] [network] Flavonoid biosynthesis (22 genes)
ath00945 [list] [network] Stilbenoid, diarylheptanoid and gingerol biosynthesis (7 genes)
Protein NP_199704.1 
BLAST NP_199704.1 
Orthologous [Ortholog page] hqt (sly)  LOC4329959 (osa)  LOC4336306 (osa)  LOC11438044 (mtr)  LOC25486922 (mtr)  LOC25487997 (mtr)  LOC25491195 (mtr)  LOC100194386 (zma)  LOC100250237 (vvi)  LOC100265530 (vvi)  LOC100279386 (zma)  LOC100801923 (gma)  LOC100806561 (gma)  LOC100820075 (gma)  LOC101256271 (sly)  LOC103828167 (bra)  LOC103870149 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 1,  nucl 1,  pero 1,  mito 1,  extr 1,  cysk 1,  nucl_plas 1  (predict for NP_199704.1)
Subcellular
localization
TargetP
other 7  (predict for NP_199704.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 14
ath00999 Biosynthesis of secondary metabolites - unclassified 5
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
Genes directly connected with HCT on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.4 4CL1 4-coumarate:CoA ligase 1 [detail] 841593
14.0 CYP98A3 cytochrome P450, family 98, subfamily A, polypeptide 3 [detail] 818686
10.4 PAL1 PHE ammonia lyase 1 [detail] 818280
6.2 CCR1 cinnamoyl coa reductase 1 [detail] 838165
4.6 RFR1 REF4-related 1 [detail] 821938
Coexpressed
gene list		 [Coexpressed gene list for HCT]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248639_at
248639_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248639_at
248639_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248639_at
248639_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834951      
Refseq ID (protein) NP_199704.1 


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