[←][→] ath   At5g55300 Gene
functional annotation
Function   DNA topoisomerase I alpha      
GO BP
GO:0048439 [list] [network] flower morphogenesis  (7 genes)  IMP  
GO:0006265 [list] [network] DNA topological change  (8 genes)  ISS  
GO:0009933 [list] [network] meristem structural organization  (66 genes)  IMP  
GO:0010075 [list] [network] regulation of meristem growth  (68 genes)  IMP  
GO:0019827 [list] [network] stem cell population maintenance  (95 genes)  IGI  
GO:0009965 [list] [network] leaf morphogenesis  (102 genes)  IMP  
GO:0006338 [list] [network] chromatin remodeling  (106 genes)  IGI  
GO:1905393 [list] [network] plant organ formation  (135 genes)  IMP  
GO:0010016 [list] [network] shoot system morphogenesis  (224 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO:0009791 [list] [network] post-embryonic development  (2282 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003917 [list] [network] DNA topoisomerase type I (single strand cut, ATP-independent) activity  (4 genes)  IGI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001190543.1  NP_001190544.1  NP_200341.1 
BLAST NP_001190543.1  NP_001190544.1  NP_200341.1 
Orthologous [Ortholog page] TOP1BETA (ath)  LOC4344685 (osa)  LOC7470821 (ppo)  LOC7483644 (ppo)  LOC25480542 (mtr)  LOC25482881 (mtr)  LOC100779575 (gma)  LOC100799837 (gma)  LOC101261043 (sly)  LOC103844971 (bra)  LOC103851889 (bra)  LOC123046987 (tae)  LOC123147367 (tae)  LOC123159991 (tae)  LOC123167539 (tae)  LOC123186278 (tae)  LOC123186281 (tae)  LOC123410275 (hvu)  LOC123428827 (hvu)  LOC123430964 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001190543.1)
nucl 9,  cyto_nucl 5  (predict for NP_001190544.1)
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_200341.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001190543.1)
other 8,  chlo 3  (predict for NP_001190544.1)
other 8,  chlo 3  (predict for NP_200341.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with TOP1ALPHA on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.1 TOP1BETA DNA topoisomerase 1 beta [detail] 835624
9.5 ESP3 RNA helicase family protein [detail] 840143
8.7 DOT2 SART-1 family [detail] 831541
Coexpressed
gene list		 [Coexpressed gene list for TOP1ALPHA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248099_at
248099_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248099_at
248099_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248099_at
248099_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835623      
Refseq ID (protein) NP_001190543.1 
NP_001190544.1 
NP_200341.1 


The preparation time of this page was 0.1 [sec].