[←][→] ath   At5g55310 Gene
functional annotation
Function   DNA topoisomerase 1 beta      
GO BP
GO:0006265 [list] [network] DNA topological change  (8 genes)  IC  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003917 [list] [network] DNA topoisomerase type I (single strand cut, ATP-independent) activity  (4 genes)  ISS  
KEGG
Protein NP_200342.1 
BLAST NP_200342.1 
Orthologous [Ortholog page] TOP1ALPHA (ath)  LOC4344685 (osa)  LOC7470821 (ppo)  LOC7483644 (ppo)  LOC25480542 (mtr)  LOC25482881 (mtr)  LOC100779575 (gma)  LOC100799837 (gma)  LOC101261043 (sly)  LOC103844971 (bra)  LOC103851889 (bra)  LOC123046987 (tae)  LOC123147367 (tae)  LOC123159991 (tae)  LOC123167539 (tae)  LOC123186278 (tae)  LOC123186281 (tae)  LOC123410275 (hvu)  LOC123428827 (hvu)  LOC123430964 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_200342.1)
Subcellular
localization
TargetP
other 9  (predict for NP_200342.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with TOP1BETA on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.1 TOP1ALPHA DNA topoisomerase I alpha [detail] 835623
8.6 AT3G62900 CW-type Zinc Finger [detail] 825465
8.5 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein [detail] 831529
6.3 AT2G20320 DENN (AEX-3) domain-containing protein [detail] 816551
Coexpressed
gene list		 [Coexpressed gene list for TOP1BETA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248109_at
248109_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248109_at
248109_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248109_at
248109_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835624      
Refseq ID (protein) NP_200342.1 


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