[←][→] ath   At5g55540 Gene
functional annotation
Function   tornado 1      
GO BP
GO:0010540 [list] [network] basipetal auxin transport  (15 genes)  IMP  
GO:0010305 [list] [network] leaf vascular tissue pattern formation  (29 genes)  IMP  
GO:0009956 [list] [network] radial pattern formation  (31 genes)  IMP  
GO:0009825 [list] [network] multidimensional cell growth  (42 genes)  IMP  
GO:0009933 [list] [network] meristem structural organization  (66 genes)  IMP  
GO:0009926 [list] [network] auxin polar transport  (69 genes)  IDA IGI  
GO:0009965 [list] [network] leaf morphogenesis  (102 genes)  IMP  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG
Protein NP_001330366.1  NP_200365.1 
BLAST NP_001330366.1  NP_200365.1 
Orthologous [Ortholog page] LOC7487528 (ppo)  LOC11444833 (mtr)  LOC100784182 (gma)  LOC100817598 (gma)  TRN1 (sly)  LOC103844989 (bra)  LOC107280430 (osa)  LOC123105045 (tae)  LOC123113341 (tae)  LOC123122854 (tae)  LOC123452258 (hvu) 
Subcellular
localization
wolf
nucl 2,  chlo 2,  cysk_nucl 1,  cyto 1,  extr 1,  chlo_mito 1  (predict for NP_001330366.1)
nucl 2,  chlo 2,  cysk_nucl 1,  cyto 1,  extr 1,  chlo_mito 1  (predict for NP_200365.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001330366.1)
other 5  (predict for NP_200365.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRN1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.6 DRD1 SNF2 domain-containing protein / helicase domain-containing protein [detail] 816136
5.3 TRM8 GPI-anchored adhesin-like protein [detail] 832749
5.2 HK2 histidine kinase 2 [detail] 833552
5.1 AT1G74390 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 843780
Coexpressed
gene list		 [Coexpressed gene list for TRN1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248059_at
248059_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248059_at
248059_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248059_at
248059_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835648      
Refseq ID (protein) NP_001330366.1 
NP_200365.1 


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