[←][→] ath   AT5G55540 Gene
functional annotation
Function   tornado 1  
GO BP
GO:0010540 [list] [network] basipetal auxin transport  (19 genes)  IMP  
GO:0009956 [list] [network] radial pattern formation  (23 genes)  IMP  
GO:0010305 [list] [network] leaf vascular tissue pattern formation  (33 genes)  IMP  
GO:0009825 [list] [network] multidimensional cell growth  (39 genes)  IMP  
GO:0009933 [list] [network] meristem structural organization  (54 genes)  IMP  
GO:0009926 [list] [network] auxin polar transport  (66 genes)  IDA IGI  
GO:0009965 [list] [network] leaf morphogenesis  (96 genes)  IMP  
GO:0009734 [list] [network] auxin-activated signaling pathway  (196 genes)  IEA  
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005525 [list] [network] GTP binding  (248 genes)  IEA  
GO:0016787 [list] [network] hydrolase activity  (3024 genes)  IEA  
KEGG
Protein NP_001330366.1  NP_200365.1 
BLAST NP_001330366.1  NP_200365.1 
Orthologous [Ortholog page] LOC7487528 (ppo)  LOC11444833 (mtr)  LOC100246876 (vvi)  LOC100784182 (gma)  LOC100817598 (gma)  TRN1 (sly)  LOC103844989 (bra)  LOC107280430 (osa)  LOC113839499 (zma) 
Subcellular
localization
wolf
nucl 2,  chlo 2,  cysk_nucl 1,  cyto 1,  extr 1,  chlo_mito 1  (predict for NP_001330366.1)
nucl 2,  chlo 2,  cysk_nucl 1,  cyto 1,  extr 1,  chlo_mito 1  (predict for NP_200365.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001330366.1)
other 5  (predict for NP_200365.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRN1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 DRD1 SNF2 domain-containing protein / helicase domain-containing protein [detail] 816136
5.7 NRPD2A nuclear RNA polymerase D2A [detail] 821960
5.5 GRL transcription activator [detail] 818077
Coexpressed
gene list		 [Coexpressed gene list for TRN1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248059_at
248059_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248059_at
248059_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248059_at
248059_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835648      
Refseq ID (protein) NP_001330366.1 
NP_200365.1 


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