[←][→] ath   At5g58610 Gene
functional annotation
Function   PHD finger transcription factor      
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001330111.1  NP_001330112.1  NP_001330113.1  NP_001330114.1  NP_001330115.1  NP_001330116.1  NP_001330117.1  NP_001330118.1  NP_001330119.1  NP_001330120.1  NP_200669.1 
BLAST NP_001330111.1  NP_001330112.1  NP_001330113.1  NP_001330114.1  NP_001330115.1  NP_001330116.1  NP_001330117.1  NP_001330118.1  NP_001330119.1  NP_001330120.1  NP_200669.1 
Orthologous [Ortholog page] AT5G63900 (ath)  LOC11405488 (mtr)  LOC11409908 (mtr)  LOC11410633 (mtr)  LOC11429698 (mtr)  LOC11432528 (mtr)  LOC18102063 (ppo)  LOC25489963 (mtr)  LOC25489964 (mtr)  LOC25490920 (mtr)  LOC100806062 (gma)  LOC100814680 (gma)  LOC100818931 (gma)  LOC101245266 (sly)  LOC101264968 (sly)  LOC101267496 (sly)  LOC102661511 (gma)  LOC102668789 (gma)  LOC103837508 (bra)  LOC103845294 (bra)  LOC103873810 (bra)  LOC107275606 (osa)  LOC123040483 (tae)  LOC123048574 (tae)  LOC123085575 (tae)  LOC123092455 (tae)  LOC123097780 (tae)  LOC123184602 (tae)  LOC123425132 (hvu)  LOC123448914 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001330111.1)
nucl 7,  cyto 2  (predict for NP_001330112.1)
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001330113.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001330114.1)
nucl 5,  cyto 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001330115.1)
nucl 5,  chlo 3,  cyto 1,  chlo_mito 1  (predict for NP_001330116.1)
nucl 6,  cyto 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001330117.1)
nucl 4,  chlo 4,  cyto 1  (predict for NP_001330118.1)
nucl 5,  cyto 2,  chlo 1,  cyto_pero 1  (predict for NP_001330119.1)
nucl 5,  cyto 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001330120.1)
nucl 5,  cyto 2,  chlo 1,  cyto_pero 1  (predict for NP_200669.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001330111.1)
other 8  (predict for NP_001330112.1)
scret 6,  mito 3  (predict for NP_001330113.1)
scret 6,  mito 3  (predict for NP_001330114.1)
other 8,  chlo 3  (predict for NP_001330115.1)
scret 6,  mito 3  (predict for NP_001330116.1)
other 8,  chlo 3  (predict for NP_001330117.1)
scret 6,  mito 3  (predict for NP_001330118.1)
scret 6,  mito 3  (predict for NP_001330119.1)
other 8,  chlo 3  (predict for NP_001330120.1)
scret 6,  mito 3  (predict for NP_200669.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
Genes directly connected with AT5G58610 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.5 NAC103 NAC domain containing protein 103 [detail] 836527
8.2 NAC044 NAC domain containing protein 44 [detail] 819872
7.2 NDB4 NAD(P)H dehydrogenase B4 [detail] 816609
6.2 ATRAD17 RADIATION SENSITIVE 17 [detail] 836745
5.7 AT1G17960 Threonyl-tRNA synthetase [detail] 838375
5.4 AT4G22960 FAM63A-like protein (DUF544) [detail] 828395
4.3 RTL3 RNAse THREE-like protein 3 [detail] 834551
Coexpressed
gene list		 [Coexpressed gene list for AT5G58610]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247772_at
247772_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247772_at
247772_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247772_at
247772_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835975      
Refseq ID (protein) NP_001330111.1 
NP_001330112.1 
NP_001330113.1 
NP_001330114.1 
NP_001330115.1 
NP_001330116.1 
NP_001330117.1 
NP_001330118.1 
NP_001330119.1 
NP_001330120.1 
NP_200669.1 


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