[←][→] ath   AT5G60410 Gene
functional annotation
Function   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein  
GO BP
GO:0010247 [list] [network] detection of phosphate ion  (1 genes)  IDA  
GO:0090352 [list] [network] regulation of nitrate assimilation  (1 genes)  IMP  
GO:0010113 [list] [network] negative regulation of systemic acquired resistance  (4 genes)  IMP  
GO:0009864 [list] [network] induced systemic resistance, jasmonic acid mediated signaling pathway  (11 genes)  IMP  
GO:0010337 [list] [network] regulation of salicylic acid metabolic process  (19 genes)  IMP  
GO:0016925 [list] [network] protein sumoylation  (19 genes)  IDA IEA  
GO:0050826 [list] [network] response to freezing  (28 genes)  IMP  
GO:2000070 [list] [network] regulation of response to water deprivation  (31 genes)  IMP  
GO:0010183 [list] [network] pollen tube guidance  (33 genes)  IMP  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0010286 [list] [network] heat acclimation  (53 genes)  IMP  
GO:0048481 [list] [network] plant ovule development  (57 genes)  IMP  
GO:0009787 [list] [network] regulation of abscisic acid-activated signaling pathway  (110 genes)  IMP  
GO:0016036 [list] [network] cellular response to phosphate starvation  (110 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (146 genes)  IMP  
GO:0009826 [list] [network] unidimensional cell growth  (279 genes)  IMP  
GO:0040008 [list] [network] regulation of growth  (315 genes)  IMP  
GO:0051301 [list] [network] cell division  (352 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IMP  
GO:0048589 [list] [network] developmental growth  (375 genes)  IMP  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0019789 [list] [network] SUMO transferase activity  (5 genes)  IDA IMP  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001032108.1  NP_001032109.2  NP_001119465.1  NP_001332003.1  NP_200849.2  NP_974969.1 
BLAST NP_001032108.1  NP_001032109.2  NP_001119465.1  NP_001332003.1  NP_200849.2  NP_974969.1 
Orthologous [Ortholog page] LOC4337672 (osa)  LOC7491127 (ppo)  LOC11410046 (mtr)  LOC11417575 (mtr)  LOC100258698 (vvi)  LOC100381570 (zma)  SIZ1B (gma)  SIZ1A (gma)  LOC100803144 (gma)  LOC100811996 (gma)  LOC101244877 (sly)  SIZ1 (sly)  LOC103635939 (zma)  LOC103845461 (bra)  LOC103851505 (bra)  LOC103873423 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for NP_001032108.1)
nucl 9  (predict for NP_001032109.2)
nucl 9  (predict for NP_001119465.1)
nucl 9  (predict for NP_001332003.1)
nucl 9  (predict for NP_200849.2)
nucl 9  (predict for NP_974969.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001032108.1)
other 8  (predict for NP_001032109.2)
other 8  (predict for NP_001119465.1)
other 8  (predict for NP_001332003.1)
other 8  (predict for NP_200849.2)
other 8  (predict for NP_974969.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SIZ1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 PI-4KBETA1 phosphatidylinositol 4-OH kinase beta1 [detail] 836528
7.5 AT3G62900 CW-type Zinc Finger [detail] 825465
6.8 AT2G01690 ARM repeat superfamily protein [detail] 814698
6.7 AT4G30780 ATP-dependent DNA helicase [detail] 829201
6.4 LRS1 Transducin/WD40 repeat-like superfamily protein [detail] 819671
5.9 SFR6 sensitive to freezing 6 [detail] 825831
Coexpressed
gene list		 [Coexpressed gene list for SIZ1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247630_at
247630_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247630_at
247630_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247630_at
247630_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836163      
Refseq ID (protein) NP_001032108.1 
NP_001032109.2 
NP_001119465.1 
NP_001332003.1 
NP_200849.2 
NP_974969.1 


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