[←][→] ath   At5g62800 Gene
functional annotation
Function   Protein with RING/U-box and TRAF-like domain    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (230 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (155 genes)
Protein NP_001331378.1  NP_201086.1 
BLAST NP_001331378.1  NP_201086.1 
Orthologous [Ortholog page] AT5G37870 (ath)  AT5G37890 (ath)  AT5G37900 (ath)  AT5G37910 (ath)  AT5G37930 (ath)  AT1G66610 (ath)  AT1G66620 (ath)  AT1G66630 (ath)  AT1G66650 (ath)  AT1G66660 (ath)  LOC4340862 (osa)  LOC7493536 (ppo)  LOC7494532 (ppo)  LOC9269391 (osa)  LOC11418747 (mtr)  LOC11425847 (mtr)  LOC11432566 (mtr)  LOC11436875 (mtr)  LOC11437704 (mtr)  LOC11445862 (mtr)  LOC18099412 (ppo)  LOC18106453 (ppo)  LOC25483069 (mtr)  LOC25483070 (mtr)  LOC25493350 (mtr)  LOC25499082 (mtr)  LOC100778869 (gma)  LOC100797881 (gma)  LOC101256260 (sly)  LOC101256849 (sly)  LOC101262084 (sly)  LOC101262896 (sly)  LOC102662420 (gma)  LOC103829298 (bra)  LOC103831113 (bra)  LOC103831115 (bra)  LOC103841498 (bra)  LOC103850097 (bra)  LOC103857391 (bra)  LOC103860069 (bra)  LOC103863762 (bra)  LOC103864155 (bra)  LOC103864598 (bra)  LOC103867898 (bra)  LOC103872071 (bra)  LOC104646203 (sly)  LOC107275945 (osa)  LOC107276150 (osa)  LOC107276602 (osa)  LOC107278743 (osa)  LOC109119263 (sly)  LOC109119702 (sly)  LOC112937424 (osa)  LOC120578306 (mtr)  LOC120580680 (mtr)  LOC120580681 (mtr)  LOC123039382 (tae)  LOC123056627 (tae)  LOC123056632 (tae)  LOC123056639 (tae)  LOC123056700 (tae)  LOC123056701 (tae)  LOC123056703 (tae)  LOC123057602 (tae)  LOC123057689 (tae)  LOC123059891 (tae)  LOC123059895 (tae)  LOC123059896 (tae)  LOC123064409 (tae)  LOC123064410 (tae)  LOC123064418 (tae)  LOC123064420 (tae)  LOC123064421 (tae)  LOC123064437 (tae)  LOC123064439 (tae)  LOC123064533 (tae)  LOC123064536 (tae)  LOC123064540 (tae)  LOC123064565 (tae)  LOC123064567 (tae)  LOC123064568 (tae)  LOC123064573 (tae)  LOC123064574 (tae)  LOC123067172 (tae)  LOC123067176 (tae)  LOC123067177 (tae)  LOC123067213 (tae)  LOC123068397 (tae)  LOC123073721 (tae)  LOC123073723 (tae)  LOC123073727 (tae)  LOC123073728 (tae)  LOC123073734 (tae)  LOC123073737 (tae)  LOC123076027 (tae)  LOC123076029 (tae)  LOC123076620 (tae)  LOC123076854 (tae)  LOC123076856 (tae)  LOC123076860 (tae)  LOC123093866 (tae)  LOC123099091 (tae)  LOC123106050 (tae)  LOC123107107 (tae)  LOC123164648 (tae)  LOC123177068 (tae)  LOC123177102 (tae)  LOC123177454 (tae)  LOC123396121 (hvu)  LOC123439208 (hvu)  LOC123439211 (hvu)  LOC123439215 (hvu)  LOC123441287 (hvu)  LOC123441292 (hvu)  LOC123441293 (hvu)  LOC123441295 (hvu)  LOC123441302 (hvu)  LOC123449949 (hvu)  LOC123450607 (hvu) 
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_001331378.1)
nucl 4,  cyto 3,  vacu 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_201086.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_001331378.1)
other 7,  chlo 4  (predict for NP_201086.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
Genes directly connected with AT5G62800 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 SCPL19 serine carboxypeptidase-like 19 [detail] 830823
6.3 AT5G22470 poly ADP-ribose polymerase 3 [detail] 832308
6.1 AT3G63040 uncharacterized protein [detail] 825479
5.9 HSD6 hydroxysteroid dehydrogenase 6 [detail] 835149
Coexpressed
gene list		 [Coexpressed gene list for AT5G62800]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247421_at
247421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247421_at
247421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247421_at
247421_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836401      
Refseq ID (protein) NP_001331378.1 
NP_201086.1 


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