[←][→] ath   AT5G63120 Gene
functional annotation
Function   P-loop containing nucleoside triphosphate hydrolases superfamily protein  
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (19 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001331871.1  NP_001331872.1  NP_001331873.1  NP_568964.1  NP_974985.1 
BLAST NP_001331871.1  NP_001331872.1  NP_001331873.1  NP_568964.1  NP_974985.1 
Orthologous [Ortholog page] LOC542146 (zma)  ER68 (sly)  RH20 (ath)  LOC7458051 (ppo)  LOC9268869 (osa)  LOC9271802 (osa)  LOC11429899 (mtr)  LOC25493727 (mtr)  LOC100248020 (vvi)  LOC100260348 (vvi)  LOC100274281 (zma)  LOC100777610 (gma)  LOC100781619 (gma)  LOC100790464 (gma)  LOC100817092 (gma)  LOC101265421 (sly)  LOC103832610 (bra)  LOC103837456 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 1,  plas 1,  pero 1  (predict for NP_001331871.1)
cyto 4,  nucl 4,  chlo 1,  plas 1,  pero 1  (predict for NP_001331872.1)
cyto 4,  nucl 4,  chlo 1,  plas 1,  pero 1  (predict for NP_001331873.1)
cyto 4,  cyto_nucl 4,  nucl 3,  chlo 1,  mito 1,  pero 1,  chlo_mito 1  (predict for NP_568964.1)
cyto 5,  nucl 2,  chlo 1,  pero 1  (predict for NP_974985.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for NP_001331871.1)
mito 6,  other 3  (predict for NP_001331872.1)
mito 6,  other 3  (predict for NP_001331873.1)
mito 6,  other 3  (predict for NP_568964.1)
mito 6,  other 3  (predict for NP_974985.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
Genes directly connected with AT5G63120 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT1G07705 NOT2 / NOT3 / NOT5 family [detail] 837284
6.2 AT2G42520 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 818852
5.2 AT2G20440 Ypt/Rab-GAP domain of gyp1p superfamily protein [detail] 816563
Coexpressed
gene list		 [Coexpressed gene list for AT5G63120]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247378_at
247378_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247378_at
247378_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247378_at
247378_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836432      
Refseq ID (protein) NP_001331871.1 
NP_001331872.1 
NP_001331873.1 
NP_568964.1 
NP_974985.1 


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