functional annotation |
Function |
Caleosin-related family protein |
|
GO BP |
GO:1902609 [list] [network] (R)-2-hydroxy-alpha-linolenic acid biosynthetic process
|
(2 genes)
|
IMP
|
|
GO:0031407 [list] [network] oxylipin metabolic process
|
(12 genes)
|
IDA
|
|
GO:0009269 [list] [network] response to desiccation
|
(25 genes)
|
IEP
TAS
|
|
GO:2000377 [list] [network] regulation of reactive oxygen species metabolic process
|
(63 genes)
|
IMP
|
|
GO:0010118 [list] [network] stomatal movement
|
(69 genes)
|
IMP
|
|
GO:0009751 [list] [network] response to salicylic acid
|
(438 genes)
|
IEP
|
|
GO:0009409 [list] [network] response to cold
|
(472 genes)
|
IEP
|
|
GO:0009651 [list] [network] response to salt stress
|
(607 genes)
|
IEP
|
|
GO:0050832 [list] [network] defense response to fungus
|
(705 genes)
|
IDA
|
|
GO:0009620 [list] [network] response to fungus
|
(999 genes)
|
IEP
|
|
GO:0009737 [list] [network] response to abscisic acid
|
(1086 genes)
|
IEP
|
|
|
GO CC |
GO:0012511 [list] [network] monolayer-surrounded lipid storage body
|
(9 genes)
|
IDA
|
|
GO:0031969 [list] [network] chloroplast membrane
|
(118 genes)
|
IDA
|
|
GO:0000325 [list] [network] plant-type vacuole
|
(785 genes)
|
HDA
|
|
GO:0005783 [list] [network] endoplasmic reticulum
|
(856 genes)
|
HDA
|
|
GO:0043231 [list] [network] intracellular membrane-bounded organelle
|
(19126 genes)
|
IDA
|
|
|
GO MF |
GO:0102070 [list] [network] 18-hydroxyoleate peroxygenase activity
|
(6 genes)
|
IEA
|
|
GO:1990137 [list] [network] plant seed peroxidase activity
|
(6 genes)
|
IDA
|
|
GO:0005509 [list] [network] calcium ion binding
|
(132 genes)
|
IDA
TAS
|
|
|
KEGG |
ath00073 [list] [network] Cutin, suberine and wax biosynthesis (37 genes) |
|
Protein |
NP_001031472.1
NP_180896.1
|
BLAST |
NP_001031472.1
NP_180896.1
|
Orthologous |
[Ortholog page]
PM13 (gma)
ATS1 (ath)
AT5G29560 (ath)
ATPXG2 (ath)
LOC4336376 (osa)
LOC7459986 (ppo)
LOC9267086 (osa)
LOC25484384 (mtr)
LOC25499703 (mtr)
LOC100802743 (gma)
LOC100813066 (gma)
LOC101244941 (sly)
LOC103844969 (bra)
LOC103854618 (bra)
LOC103857486 (bra)
LOC103865264 (bra)
LOC103866541 (bra)
LOC103867540 (bra)
LOC123041629 (tae)
LOC123041631 (tae)
LOC123041632 (tae)
LOC123041702 (tae)
LOC123041703 (tae)
LOC123049600 (tae)
LOC123049602 (tae)
LOC123053883 (tae)
LOC123053886 (tae)
LOC123054027 (tae)
LOC123185704 (tae)
LOC123185772 (tae)
LOC123185773 (tae)
LOC123189769 (tae)
LOC123430511 (hvu)
LOC123430517 (hvu)
LOC123430519 (hvu)
LOC123430522 (hvu)
|
Subcellular localization wolf |
nucl 3,
cysk 3,
cysk_nucl 3,
cyto 2
|
(predict for NP_001031472.1)
|
cysk 8,
cyto 1,
cyto_E.R. 1
|
(predict for NP_180896.1)
|
|
Subcellular localization TargetP |
other 6,
chlo 5
|
(predict for NP_001031472.1)
|
other 6,
chlo 5
|
(predict for NP_180896.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath04016 |
MAPK signaling pathway - plant |
3 |
|
ath04075 |
Plant hormone signal transduction |
2 |
|
Genes directly connected with RD20 on the network
coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
6.1 |
AT2G34810 |
FAD-binding Berberine family protein |
[detail] |
818046 |
6.0 |
NAC019 |
NAC domain containing protein 19 |
[detail] |
841722 |
5.6 |
HAI1 |
PP2C protein (Clade A protein phosphatases type 2C) |
[detail] |
836040 |
5.1 |
AT2G47780 |
Rubber elongation factor protein (REF) |
[detail] |
819390 |
5.0 |
SULTR3;1 |
sulfate transporter 3;1 |
[detail] |
824353 |
|
Coexpressed gene list |
[Coexpressed gene list for RD20]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
255795_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
255795_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
255795_at
X axis is samples (xls file), and Y axis is log-expression.
|