functional annotation |
Function |
Caleosin-related family protein |
|
GO BP |
GO:1902609 [list] [network] (R)-2-hydroxy-alpha-linolenic acid biosynthetic process
|
(2 genes)
|
IMP
|
|
GO:0009269 [list] [network] response to desiccation
|
(24 genes)
|
IEP
TAS
|
|
GO:0031407 [list] [network] oxylipin metabolic process
|
(25 genes)
|
IDA
|
|
GO:2000377 [list] [network] regulation of reactive oxygen species metabolic process
|
(54 genes)
|
IMP
|
|
GO:0010118 [list] [network] stomatal movement
|
(59 genes)
|
IMP
|
|
GO:0009751 [list] [network] response to salicylic acid
|
(215 genes)
|
IEP
|
|
GO:0009409 [list] [network] response to cold
|
(411 genes)
|
IEP
|
|
GO:0009651 [list] [network] response to salt stress
|
(485 genes)
|
IEP
|
|
GO:0050832 [list] [network] defense response to fungus
|
(517 genes)
|
IDA
|
|
GO:0009737 [list] [network] response to abscisic acid
|
(574 genes)
|
IEP
|
|
GO:0009620 [list] [network] response to fungus
|
(595 genes)
|
IEP
|
|
GO:0055114 [list] [network] oxidation-reduction process
|
(1468 genes)
|
IEA
|
|
|
GO CC |
GO:0012511 [list] [network] monolayer-surrounded lipid storage body
|
(18 genes)
|
IDA
|
|
GO:0031969 [list] [network] chloroplast membrane
|
(259 genes)
|
IDA
|
|
GO:0005783 [list] [network] endoplasmic reticulum
|
(877 genes)
|
HDA
|
|
GO:0005773 [list] [network] vacuole
|
(1133 genes)
|
IDA
|
|
GO:0043231 [list] [network] intracellular membrane-bounded organelle
|
(19648 genes)
|
IDA
|
|
|
GO MF |
|
KEGG |
ath00073 [list] [network] Cutin, suberine and wax biosynthesis (31 genes) |
|
Protein |
NP_001031472.1
NP_180896.1
|
BLAST |
NP_001031472.1
NP_180896.1
|
Orthologous |
[Ortholog page]
PM13 (gma)
ATS1 (ath)
AT5G29560 (ath)
ATPXG2 (ath)
LOC4336376 (osa)
LOC7459986 (ppo)
LOC9267086 (osa)
LOC25484384 (mtr)
LOC25499703 (mtr)
LOC100216957 (zma)
LOC100264814 (vvi)
LOC100802743 (gma)
LOC100813066 (gma)
LOC101244941 (sly)
LOC103844969 (bra)
LOC103854618 (bra)
LOC103857486 (bra)
LOC103865264 (bra)
LOC103866541 (bra)
LOC103867540 (bra)
|
Subcellular localization wolf |
nucl 3,
cysk 3,
cysk_nucl 3,
cyto 2
|
(predict for NP_001031472.1)
|
cysk 8,
cyto 1,
cyto_E.R. 1
|
(predict for NP_180896.1)
|
|
Subcellular localization TargetP |
other 6,
chlo 5
|
(predict for NP_001031472.1)
|
other 6,
chlo 5
|
(predict for NP_180896.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath04016 |
MAPK signaling pathway - plant |
4 |
|
ath04075 |
Plant hormone signal transduction |
3 |
|
Genes directly connected with RD20 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
6.0 |
NAC019 |
NAC domain containing protein 19 |
[detail] |
841722 |
5.6 |
AT2G34810 |
FAD-binding Berberine family protein |
[detail] |
818046 |
5.2 |
HAI1 |
PP2C protein (Clade A protein phosphatases type 2C) |
[detail] |
836040 |
5.1 |
SULTR3;1 |
sulfate transporter 3;1 |
[detail] |
824353 |
4.5 |
AT2G47780 |
Rubber elongation factor protein (REF) |
[detail] |
819390 |
|
Coexpressed gene list |
[Coexpressed gene list for RD20]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
255795_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
255795_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
255795_at
X axis is samples (xls file), and Y axis is log-expression.
|