functional annotation |
Function |
Putative plant snare 11 |
|
GO BP |
GO:0048280 [list] [network] vesicle fusion with Golgi apparatus
|
(8 genes)
|
IBA
|
|
GO:0006896 [list] [network] Golgi to vacuole transport
|
(19 genes)
|
IBA
|
|
GO:0042147 [list] [network] retrograde transport, endosome to Golgi
|
(24 genes)
|
IBA
|
|
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
|
(29 genes)
|
IEA
|
|
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport
|
(35 genes)
|
IBA
|
|
GO:0006623 [list] [network] protein targeting to vacuole
|
(36 genes)
|
IBA
|
|
GO:0000911 [list] [network] cytokinesis by cell plate formation
|
(63 genes)
|
TAS
|
|
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport
|
(84 genes)
|
IBA
|
|
|
GO CC |
|
GO MF |
|
KEGG |
|
|
Protein |
NP_565800.1
|
BLAST |
NP_565800.1
|
Orthologous |
[Ortholog page]
LOC9267986 (osa)
LOC25493574 (mtr)
LOC100193631 (zma)
LOC100259220 (vvi)
LOC100786429 (gma)
LOC101253216 (sly)
LOC103857561 (bra)
LOC103865434 (bra)
LOC103867382 (bra)
|
Subcellular localization wolf |
nucl 4,
golg 4,
cyto 1,
plas 1,
vacu 1,
cyto_plas 1
|
(predict for NP_565800.1)
|
|
Subcellular localization TargetP |
other 8
|
(predict for NP_565800.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
Genes directly connected with NPSN11 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
8.8 |
PLP3b |
thioredoxin domain PLP3B-like protein |
[detail] |
836773 |
8.4 |
UDG4 |
UDP-glucose 6-dehydrogenase family protein |
[detail] |
833928 |
7.2 |
AT5G04160 |
Nucleotide-sugar transporter family protein |
[detail] |
830294 |
6.8 |
AT1G21070 |
Nucleotide-sugar transporter family protein |
[detail] |
838703 |
6.5 |
RABH1e |
RAB GTPase homolog H1E |
[detail] |
830890 |
6.3 |
AT5G02430 |
Transducin/WD40 repeat-like superfamily protein |
[detail] |
831780 |
6.1 |
AT5G27490 |
Integral membrane Yip1 family protein |
[detail] |
832808 |
6.0 |
EB1B |
end binding protein 1B |
[detail] |
836370 |
5.7 |
AT5G62580 |
ARM repeat superfamily protein |
[detail] |
836379 |
5.6 |
CPK2 |
calmodulin-domain protein kinase cdpk |
[detail] |
820235 |
4.5 |
RPA |
root and pollen arfgap |
[detail] |
818088 |
|
Coexpressed gene list |
[Coexpressed gene list for NPSN11]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
266489_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
266489_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
266489_at
X axis is samples (xls file), and Y axis is log-expression.
|