functional annotation |
Function |
PsbQ-like 1 |
|
GO BP |
GO:0009767 [list] [network] photosynthetic electron transport chain
|
(35 genes)
|
IBA
IMP
|
|
GO:0019684 [list] [network] photosynthesis, light reaction
|
(109 genes)
|
TAS
|
|
|
GO CC |
GO:0009344 [list] [network] nitrite reductase complex [NAD(P)H]
|
(2 genes)
|
IMP
|
|
GO:0009654 [list] [network] photosystem II oxygen evolving complex
|
(21 genes)
|
TAS
|
|
GO:0009543 [list] [network] chloroplast thylakoid lumen
|
(59 genes)
|
IDA
|
|
GO:0019898 [list] [network] extrinsic component of membrane
|
(62 genes)
|
IEA
|
|
GO:0009535 [list] [network] chloroplast thylakoid membrane
|
(373 genes)
|
IDA
|
|
GO:0009534 [list] [network] chloroplast thylakoid
|
(474 genes)
|
IDA
|
|
GO:0005829 [list] [network] cytosol
|
(3506 genes)
|
HDA
|
|
GO:0009507 [list] [network] chloroplast
|
(5095 genes)
|
IBA
IDA
ISM
|
|
|
GO MF |
GO:0045156 [list] [network] electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
|
(6 genes)
|
IBA
IMP
|
|
GO:0005509 [list] [network] calcium ion binding
|
(242 genes)
|
IEA
|
|
|
KEGG |
ath00195 [list] [network] Photosynthesis (76 genes) |
|
Protein |
NP_566137.1
|
BLAST |
NP_566137.1
|
Orthologous |
[Ortholog page]
LOC4342192 (osa)
LOC11405533 (mtr)
LOC100253736 (vvi)
LOC100273120 (zma)
LOC100783530 (gma)
LOC100814163 (gma)
LOC101249865 (sly)
LOC103850067 (bra)
LOC103870981 (bra)
|
Subcellular localization wolf |
chlo 6,
mito 3,
cyto 1,
cyto_mito 1,
mito_plas 1
|
(predict for NP_566137.1)
|
|
Subcellular localization TargetP |
chlo 6,
other 3
|
(predict for NP_566137.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath00195 |
Photosynthesis |
2 |
|
Genes directly connected with PnsL3 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
11.9 |
PnsB3 |
NDH-dependent cyclic electron flow 1 |
[detail] |
820871 |
11.2 |
NdhN |
oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor |
[detail] |
835938 |
11.0 |
CRR7 |
chlororespiratory reduction 7 |
[detail] |
833917 |
11.0 |
AT4G12830 |
alpha/beta-Hydrolases superfamily protein |
[detail] |
826895 |
9.6 |
AT1G27480 |
alpha/beta-Hydrolases superfamily protein |
[detail] |
839639 |
9.2 |
NdhM |
subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex |
[detail] |
3770591 |
9.0 |
DFD |
DHFS-FPGS homolog D |
[detail] |
824729 |
8.0 |
CP12-2 |
CP12 domain-containing protein 2 |
[detail] |
825414 |
7.7 |
FC2 |
ferrochelatase 2 |
[detail] |
817589 |
7.3 |
Cpn60beta4 |
TCP-1/cpn60 chaperonin family protein |
[detail] |
839164 |
7.2 |
AT3G10840 |
alpha/beta-Hydrolases superfamily protein |
[detail] |
820253 |
6.9 |
MES18 |
methyl esterase 18 |
[detail] |
835943 |
6.8 |
AT2G03420 |
hypothetical protein |
[detail] |
814871 |
6.7 |
AT3G05625 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
819729 |
6.7 |
ACR11 |
uridylyltransferase-like protein |
[detail] |
838259 |
5.8 |
AT4G10300 |
RmlC-like cupins superfamily protein |
[detail] |
826622 |
5.7 |
AT5G62140 |
ATP-dependent Clp protease ATP-binding subunit |
[detail] |
836334 |
5.6 |
RBCS1B |
Ribulose bisphosphate carboxylase (small chain) family protein |
[detail] |
833830 |
4.0 |
NPC2 |
non-specific phospholipase C2 |
[detail] |
817228 |
|
Coexpressed gene list |
[Coexpressed gene list for PnsL3]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
258956_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
258956_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
258956_at
X axis is samples (xls file), and Y axis is log-expression.
|