ATTED-II : GeneID search result

[←][→] ath AT3G56440 Gene

functional annotation

Function

autophagy 18 D-like protein

GO BP

GO:0034497 [list] [network] protein localization to phagophore assembly site	(5 genes)	IBA
GO:0000422 [list] [network] autophagy of mitochondrion	(12 genes)	IBA
GO:0000045 [list] [network] autophagosome assembly	(19 genes)	IBA
GO:0006497 [list] [network] protein lipidation	(51 genes)	IBA
GO:0015031 [list] [network] protein transport	(724 genes)	IEA

GO CC

GO:0034045 [list] [network] phagophore assembly site membrane	(9 genes)	IBA
GO:0019898 [list] [network] extrinsic component of membrane	(62 genes)	IBA
GO:0005774 [list] [network] vacuolar membrane	(624 genes)	IEA
GO:0005829 [list] [network] cytosol	(3506 genes)	IBA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0080025 [list] [network] phosphatidylinositol-3,5-bisphosphate binding	(5 genes)	IBA
GO:0032266 [list] [network] phosphatidylinositol-3-phosphate binding	(6 genes)	IBA

KEGG

Protein

NP_001326815.1 NP_001326816.1 NP_191203.2

BLAST

NP_001326815.1 NP_001326816.1 NP_191203.2

Orthologous

[Ortholog page] ATG18C (ath) LOC4325192 (osa) LOC25489798 (mtr) LOC100248334 (vvi) LOC100501577 (zma) LOC100501634 (zma) LOC100817169 (gma) LOC100817377 (gma) LOC101246636 (sly) LOC103841551 (bra) LOC103865844 (bra)

Subcellular
localization
wolf

cyto 6, nucl 3	(predict for NP_001326815.1)
nucl 4, cyto 4, cyto_nucl 4	(predict for NP_001326816.1)
nucl 4, cyto 4, cyto_nucl 4	(predict for NP_191203.2)

Subcellular
localization
TargetP

other 7	(predict for NP_001326815.1)
other 7	(predict for NP_001326816.1)
other 7	(predict for NP_191203.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with ATG18D on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.8	ATG18C	autophagy-like protein	[detail]	818678
5.5	ATHXK4	Hexokinase	[detail]	821543
5.4	AT1G80510	Transmembrane amino acid transporter family protein	[detail]	844390

Coexpressed
gene list

[Coexpressed gene list for ATG18D]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

251686_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

251686_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

251686_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	824811
Refseq ID (protein)	NP_001326815.1
	NP_001326816.1
	NP_191203.2

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