functional annotation |
Function |
cyclic nucleotide-gated cation channel 4 |
|
GO BP |
GO:0009626 [list] [network] plant-type hypersensitive response
|
(73 genes)
|
IMP
|
|
|
GO CC |
GO:0005886 [list] [network] plasma membrane
|
(3771 genes)
|
IEA
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
GO:0016020 [list] [network] membrane
|
(7839 genes)
|
IDA
|
|
|
GO MF |
GO:0030552 [list] [network] cAMP binding
|
(20 genes)
|
IEA
|
|
GO:0030553 [list] [network] cGMP binding
|
(20 genes)
|
IEA
|
|
GO:0005216 [list] [network] ion channel activity
|
(129 genes)
|
IEA
|
|
GO:0005516 [list] [network] calmodulin binding
|
(182 genes)
|
IEA
TAS
|
|
GO:0008324 [list] [network] cation transmembrane transporter activity
|
(429 genes)
|
IDA
|
|
|
KEGG |
|
|
Protein |
NP_001190536.1
NP_001332114.1
NP_200236.1
NP_851188.1
|
BLAST |
NP_001190536.1
NP_001332114.1
NP_200236.1
NP_851188.1
|
Orthologous |
[Ortholog page]
LOC4339240 (osa)
LOC9271041 (osa)
LOC11406879 (mtr)
LOC25502565 (mtr)
LOC100265816 (vvi)
LOC100273558 (zma)
LOC100285121 (zma)
LOC100783341 (gma)
LOC100796761 (gma)
LOC100800795 (gma)
LOC101246478 (sly)
LOC101265895 (sly)
LOC103844883 (bra)
LOC103851982 (bra)
|
Subcellular localization wolf |
plas 8,
nucl 1
|
(predict for NP_001190536.1)
|
plas 8,
nucl 1
|
(predict for NP_001332114.1)
|
plas 8,
nucl 1
|
(predict for NP_200236.1)
|
plas 8,
nucl 1
|
(predict for NP_851188.1)
|
|
Subcellular localization TargetP |
other 7,
mito 3
|
(predict for NP_001190536.1)
|
other 7,
mito 3
|
(predict for NP_001332114.1)
|
other 7,
mito 3
|
(predict for NP_200236.1)
|
other 7,
mito 3
|
(predict for NP_851188.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
Genes directly connected with CNGC4 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
5.6 |
SSL4 |
strictosidine synthase-like 4 |
[detail] |
824305 |
5.5 |
KT2/3 |
potassium transport 2/3 |
[detail] |
828311 |
5.2 |
PEX11B |
peroxin 11B |
[detail] |
823897 |
5.1 |
UGT71B1 |
UDP-glucosyl transferase 71B1 |
[detail] |
821729 |
5.0 |
AT5G21100 |
Plant L-ascorbate oxidase |
[detail] |
832234 |
4.7 |
AT2G40435 |
transcription factor SCREAM-like protein |
[detail] |
818637 |
4.7 |
AT5G54240 |
membrane lipoprotein lipid attachment site-like protein, putative (DUF1223) |
[detail] |
835512 |
4.7 |
MES10 |
methylesterase |
[detail] |
824208 |
4.6 |
UMAMIT47 |
nodulin MtN21 /EamA-like transporter family protein |
[detail] |
822432 |
4.4 |
PES2 |
Esterase/lipase/thioesterase family protein |
[detail] |
822299 |
4.3 |
AGO7 |
Argonaute family protein |
[detail] |
843276 |
3.9 |
CID9 |
CTC-interacting domain 9 |
[detail] |
820668 |
3.7 |
ESM1 |
GDSL-like lipase/acylhydrolase superfamily protein |
[detail] |
820639 |
|
Coexpressed gene list |
[Coexpressed gene list for CNGC4]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
248153_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
248153_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
248153_at
X axis is samples (xls file), and Y axis is log-expression.
|