[←][→] ath   AT5G63920 Gene
functional annotation
Function   topoisomerase 3alpha  
GO BP
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (10 genes)  IMP  
GO:0006265 [list] [network] DNA topological change  (10 genes)  IBA  
GO:0007059 [list] [network] chromosome segregation  (108 genes)  IMP  
GO:0051321 [list] [network] meiotic cell cycle  (166 genes)  IMP  
GO:0000278 [list] [network] mitotic cell cycle  (198 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (295 genes)  IMP  
GO CC
GO:0005694 [list] [network] chromosome  (348 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0003917 [list] [network] DNA topoisomerase type I (single strand cut, ATP-independent) activity  (4 genes)  IEA  
GO:0003916 [list] [network] DNA topoisomerase activity  (14 genes)  IBA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG ath03440 [list] [network] Homologous recombination (67 genes)
Protein NP_201197.1 
BLAST NP_201197.1 
Orthologous [Ortholog page] LOC7479156 (ppo)  LOC9269718 (osa)  LOC11428648 (mtr)  LOC100248256 (vvi)  LOC100273582 (zma)  LOC100818971 (gma)  LOC101262415 (sly)  LOC103855218 (bra) 
Subcellular
localization
wolf
chlo 5,  nucl 3,  mito 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_201197.1)
Subcellular
localization
TargetP
mito 4,  chlo 3  (predict for NP_201197.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03440 Homologous recombination 2
Genes directly connected with TOP3A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 CHR1 chromatin remodeling 1 [detail] 836808
8.2 ICU2 DNA-directed DNA polymerase [detail] 836845
8.1 CTF18 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 839431
6.1 BIO1 adenosylmethionine-8-amino-7-oxononanoate transaminase [detail] 835863
5.3 AT4G39790 bZIP transcription factor, putative (DUF630 and DUF632) [detail] 830137
4.4 AT1G16220 Protein phosphatase 2C family protein [detail] 838190
Coexpressed
gene list		 [Coexpressed gene list for TOP3A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247301_at
247301_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247301_at
247301_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247301_at
247301_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836513      
Refseq ID (protein) NP_201197.1 


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