CoexViewer

Coexpression detail for RIE1 and SAG18
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath RIE1 RING-finger protein for embryogenesi 814703 At2g01735 0.52 5.81 5.46 4.57 492.50 2.82 1.54 1.25 1.91 1.14 2.81
ath SAG18 senescence associated gene 18 843459 At1g71190 0.52
Platform:

coex z = 5.4642



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 814703
(z-scored expression)		 843459
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.5 -6.4 -5.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
25.4 -5.2 -4.9 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
23.0 4.4 5.2 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
21.4 -4.5 -4.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.9 -4.1 -4.1 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
16.9 4.0 4.2 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
16.8 -4.1 -4.1 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
16.6 -4.1 -4.1 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
16.4 4.3 3.8 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.7 -3.7 -4.2 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.7 -5.0 -3.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
15.5 -4.6 -3.4 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
15.3 -3.8 -4.0 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
15.0 -3.6 -4.1 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
14.7 -4.0 -3.7 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
14.5 3.7 3.9 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
14.0 -3.6 -3.9 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.8 3.6 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.5 -3.6 -3.8 SRP297920 SRR13253061 Transcript analysis under phosphate and iron deprivation in 7 day old Arabidopsis thaliana seedlings
13.0 -2.6 -4.9 SRP214325 SRR9672820 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
12.8 -3.9 -3.3 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.7 -4.1 -3.1 ERP115370 ERR3333443 Arabidopsis tissue atlas
12.7 -3.8 -3.3 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.6 -3.4 -3.7 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
12.4 2.7 4.5 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.3 -3.5 -3.5 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.3 -3.7 -3.3 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.7 3.2 3.7 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
11.7 3.5 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.5 -3.4 -3.3 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
11.5 3.4 3.4 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 3.4 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.1 3.3 3.4 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -3.9 -2.8 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
10.6 3.1 3.4 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
10.5 -3.7 -2.8 SRP063017 SRR2221844 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
10.5 -3.3 -3.2 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.3 -3.3 -3.1 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 -3.3 -3.1 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.2 3.2 3.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.2 -3.1 -3.4 SRP103736 SRR5440873 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.2 -3.9 -2.6 SRP100712 SRR5285741 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
10.2 3.0 3.4 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.4 -2.9 SRP249854 SRR11103165 A dynamic pattern of local auxin sources is required for root regeneration
Note: Samples whose contribution is more than 10 are outputted.



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