CoexViewer
Coexpression detail for AGL30 and AT2G20440
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | AGL30 | AGAMOUS-like 30 | 814835 | At2g03060 | 0.34 | 5.20 | 5.68 | 3.09 | |
| ath | AT2G20440 | Ypt/Rab-GAP domain of gyp1p superfamily protein | 816563 | At2g20440 | 0.34 |
|
coex z = 5.6803 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 814835 (z-scored expression) |
816563 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 28.3 | -5.3 | -5.3 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 27.3 | -4.4 | -6.1 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 27.1 | -6.9 | -3.9 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 23.1 | -4.7 | -4.9 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 20.2 | -4.2 | -4.8 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 17.9 | -4.0 | -4.5 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 17.4 | -4.8 | -3.6 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 16.9 | -3.5 | -4.9 | ERP123539 | ERR4471738 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 16.1 | -4.6 | -3.5 | ERP123539 | ERR4471737 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 15.5 | -4.4 | -3.5 | ERP123539 | ERR4471736 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 15.4 | -3.9 | -4.0 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 15.2 | -4.8 | -3.2 | SRP035269 | SRR1105593 | RNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids |
| 15.1 | -3.2 | -4.7 | SRP126872 | SRR6381404 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 15.0 | -4.2 | -3.6 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 15.0 | 3.7 | 4.0 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.0 | -3.8 | -3.6 | SRP169564 | SRR8206413 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 13.9 | -4.4 | -3.2 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 13.7 | -3.4 | -4.0 | SRP017386 | SRR627679 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 13.3 | -7.4 | -1.8 | SRP100712 | SRR5285649 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 13.3 | -3.7 | -3.5 | ERP123539 | ERR4471734 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.3 | -3.7 | -3.5 | ERP123539 | ERR4471735 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.0 | -4.1 | -3.2 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 12.6 | -5.7 | -2.2 | SRP267137 | SRR12005745 | ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks |
| 12.4 | -3.1 | -4.0 | SRP229078 | SRR10416640 | Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency |
| 12.4 | -3.3 | -3.7 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.1 | 3.5 | 3.4 | SRP037984 | SRR1170682 | Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression |
| 11.6 | -3.5 | -3.3 | ERP116123 | ERR3414637 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 11.4 | -6.7 | -1.7 | SRP101274 | SRR5308791 | During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight. |
| 11.4 | -3.4 | -3.3 | SRP073724 | SRR3419765 | Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system |
| 11.1 | -3.1 | -3.5 | ERP123539 | ERR4471739 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.9 | -3.5 | -3.1 | SRP073485 | SRR3401791 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 10.9 | -3.3 | -3.3 | SRP272650 | SRR12272429 | Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity |
| 10.8 | -3.3 | -3.3 | SRP282437 | SRR12642218 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 10.7 | -3.5 | -3.0 | SRP150217 | SRR7289615 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.6 | -3.5 | -3.1 | SRP014482 | SRR525113 | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
| 10.5 | -3.7 | -2.9 | SRP132865 | SRR6726414 | Molecular basis of flowering under natural long-day conditions in Arabidopsis |
| 10.5 | 3.3 | 3.2 | SRP029957 | SRR988015 | Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression |
| 10.4 | 3.0 | 3.4 | SRP365283 | SRR18430906 | Time-series RNAseq analysis following lateral root induction by gravistimulation |
| 10.4 | -3.7 | -2.8 | SRP251062 | SRR11206305 | Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants |
| 10.3 | 3.1 | 3.3 | SRP351684 | SRR17281133 | Transcriptomic profile of FERONIA mutant treated with Aradopside |
| 10.2 | -3.1 | -3.3 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.2 | -2.7 | -3.7 | SRP093913 | SRR5054306 | Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis |
| 10.2 | -3.9 | -2.6 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 10.2 | 2.9 | 3.5 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 10.1 | -3.6 | -2.9 | SRP173260 | SRR8310903 | Functional relationship of GUN1 and FUG1 in plastid proteostasis |
The preparation time of this page was 0.8 [sec].
