CoexViewer
Coexpression detail for EXPA15 and AT3G44940
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | EXPA15 | expansin A15 | 814838 | At2g03090 | 0.51 | 6.43 | 6.28 | 4.85 | 8.70 | 2.92 | 4.80 | 2.62 | 1.83 | 0.70 | 3.89 | |
| ath | AT3G44940 | enabled-like protein (DUF1635) | 823629 | At3g44940 | 0.51 |
|
coex z = 6.2789 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 814838 (z-scored expression) |
823629 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 30.9 | -5.6 | -5.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 20.6 | 4.4 | 4.7 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 20.1 | -3.8 | -5.3 | SRP091641 | SRR4426675 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 20.1 | -3.8 | -5.3 | SRP091641 | SRR4426507 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 18.7 | 4.2 | 4.4 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 16.2 | -4.4 | -3.7 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 15.9 | -3.2 | -5.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 15.2 | -3.7 | -4.2 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 14.9 | -3.5 | -4.2 | SRP151348 | SRR7429877 | Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity |
| 14.9 | -3.4 | -4.4 | SRP163044 | SRR7947075 | Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA |
| 14.3 | -4.0 | -3.6 | SRP306749 | SRR13724791 | The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11] |
| 13.3 | -2.6 | -5.1 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 12.1 | -2.8 | -4.3 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 11.5 | -2.7 | -4.2 | SRP339340 | SRR16119311 | Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction |
| 11.5 | -2.9 | -4.0 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 11.5 | -3.8 | -3.1 | SRP091641 | SRR4426959 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.5 | -2.8 | -4.1 | SRP279992 | SRR12582696 | Gene expression responses to ABA and to osmotic stress in the bon123 triple mutant |
| 10.9 | -3.5 | -3.1 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 10.8 | -2.9 | -3.7 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 10.8 | -2.0 | -5.3 | SRP091641 | SRR4426582 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.6 | -3.1 | -3.4 | SRP090416 | SRR4293721 | Photorespiration is crucial to the dynamic response of photosynthetic metabolism and stomatal movement to altered CO2 availability |
| 10.5 | -2.5 | -4.2 | SRP114806 | SRR5894632 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.4 | -2.5 | -4.1 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.3 | -2.6 | -3.9 | SRP101641 | SRR5330614 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.2 | -1.5 | -6.7 | SRP103817 | SRR5444399 | Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana |
| 10.1 | -4.1 | -2.4 | ERP116123 | ERR3414876 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.0 | -5.1 | -2.0 | SRP214325 | SRR9672835 | Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age. |
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