CoexViewer
Coexpression detail for AT2G12400 and AT5G17210
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT2G12400 | plasma membrane fusion protein | 815712 | At2g12400 | 0.69 | 3.91 | 3.39 | 3.38 | 184.70 | 0.87 | 2.38 | 0.31 | 2.49 | 1.96 | -0.23 | |
| ath | AT5G17210 | transmembrane protein, putative (DUF1218) | 831585 | At5g17210 | 0.69 |
|
coex z = 3.3857 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 815712 (z-scored expression) |
831585 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 32.8 | -5.8 | -5.7 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 26.4 | -5.4 | -4.9 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 20.0 | -2.8 | -7.3 | SRP091641 | SRR4426895 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 19.5 | -4.4 | -4.4 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 17.0 | -4.4 | -3.9 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 15.1 | -2.9 | -5.1 | SRP018034 | SRR2079771 | Time-course transcriptome of wild-type Arabidopsis leaf |
| 14.5 | -2.7 | -5.3 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 13.5 | -3.0 | -4.6 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 13.1 | 4.4 | 3.0 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.8 | -2.4 | -5.3 | SRP277946 | SRR12470034 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.6 | 3.1 | 4.0 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 12.3 | -2.8 | -4.4 | SRP126574 | SRR6369550 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 11.9 | -3.6 | -3.3 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 11.8 | -3.1 | -3.8 | SRP050945 | SRR1696859 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 11.6 | -3.4 | -3.4 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.6 | -2.9 | -4.0 | SRP154321 | SRR7535978 | Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse] |
| 11.2 | 3.3 | 3.4 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 11.2 | -3.2 | -3.5 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 11.1 | -3.2 | -3.5 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 10.7 | -3.9 | -2.8 | SRP100712 | SRR5285666 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 10.5 | -2.5 | -4.3 | SRP091641 | SRR4426434 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.3 | -2.7 | -3.9 | SRP100712 | SRR5285650 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 10.2 | -3.6 | -2.9 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
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