CoexViewer
Coexpression detail for TRM26 and AT4G27100
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | TRM26 | RB1-inducible coiled-coil protein | 816262 | At2g17550 | 0.62 | 5.09 | 5.76 | 3.52 | |
| ath | AT4G27100 | Ypt/Rab-GAP domain of gyp1p superfamily protein | 828818 | At4g27100 | 0.62 |
|
coex z = 5.7635 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 816262 (z-scored expression) |
828818 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 32.0 | -5.0 | -6.4 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 29.8 | -6.4 | -4.7 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 28.5 | -5.5 | -5.2 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 24.3 | -5.9 | -4.2 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 16.8 | -3.8 | -4.4 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 15.1 | -3.7 | -4.1 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 15.0 | -3.8 | -4.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 15.0 | -3.7 | -4.1 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 15.0 | 4.3 | 3.5 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.8 | -4.3 | -3.5 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 14.8 | -3.7 | -4.0 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 14.6 | -4.0 | -3.7 | SRP257291 | SRR11568018 | Gene expression in Arabidopsis expressing a Hyaloperonospora arabidopsidis effector |
| 14.6 | -3.7 | -3.9 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 14.3 | -3.4 | -4.2 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 13.8 | -4.1 | -3.4 | ERP115370 | ERR3333439 | Arabidopsis tissue atlas |
| 13.7 | -3.3 | -4.2 | SRP285119 | SRR12698780 | Time of day prioritizes the pool of translating mRNAs in response to heat stress |
| 13.0 | -3.5 | -3.7 | SRP103736 | SRR5440882 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 12.8 | -3.2 | -4.0 | SRP132865 | SRR6726414 | Molecular basis of flowering under natural long-day conditions in Arabidopsis |
| 12.6 | -3.5 | -3.6 | SRP039091 | SRR1179986 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 12.4 | -3.4 | -3.7 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 12.2 | -3.3 | -3.7 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 12.2 | 3.2 | 3.8 | SRP277946 | SRR12470067 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.0 | 3.3 | 3.6 | SRP277946 | SRR12470191 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.8 | 3.8 | 3.1 | SRP277946 | SRR12470208 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.7 | -3.5 | -3.3 | SRP103736 | SRR5440873 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 11.7 | -4.3 | -2.7 | SRP132865 | SRR6726416 | Molecular basis of flowering under natural long-day conditions in Arabidopsis |
| 11.6 | 3.6 | 3.2 | SRP277946 | SRR12469632 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.2 | 3.2 | 3.5 | SRP311610 | SRR14028736 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 11.1 | -3.1 | -3.6 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.1 | 3.2 | 3.5 | SRP311610 | SRR14028738 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 11.0 | -4.5 | -2.4 | SRP172180 | SRR8275310 | Transcript profiles of developing Arabidopsis dgat1-1 mutant seed |
| 11.0 | 3.3 | 3.3 | SRP277946 | SRR12470201 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.9 | 3.2 | 3.4 | SRP037984 | SRR1170682 | Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression |
| 10.9 | -3.6 | -3.1 | SRP249854 | SRR11103165 | A dynamic pattern of local auxin sources is required for root regeneration |
| 10.8 | 3.2 | 3.4 | SRP311610 | SRR14028737 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 10.8 | 3.2 | 3.4 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.7 | -2.8 | -3.9 | ERP115370 | ERR3333436 | Arabidopsis tissue atlas |
| 10.6 | -2.5 | -4.2 | SRP169564 | SRR8206413 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 10.5 | -3.2 | -3.3 | SRP039091 | SRR1179987 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 10.4 | 3.1 | 3.4 | SRP311610 | SRR14028739 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 10.1 | 4.1 | 2.5 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 10.1 | -3.3 | -3.0 | SRP065994 | SRR2932456 | Identification of plant vacuolar transporters mediating phosphate storage |
| 10.1 | -3.1 | -3.3 | SRP073485 | SRR3401812 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 10.0 | 3.1 | 3.2 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
The preparation time of this page was 0.7 [sec].
