CoexViewer
Coexpression detail for TRM26 and AT1G77020
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | TRM26 | RB1-inducible coiled-coil protein | 816262 | At2g17550 | 0.62 | 3.91 | 3.29 | 3.48 | 1511.60 | 3.56 | 0.61 | 1.44 | 2.98 | 0.70 | 1.92 | |
| ath | AT1G77020 | DNAJ heat shock N-terminal domain-containing protein | 844038 | At1g77020 | 0.62 |
|
coex z = 3.2859 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 816262 (z-scored expression) |
844038 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 30.7 | -5.6 | -5.5 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 26.4 | -5.9 | -4.5 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 25.0 | -5.0 | -5.0 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 23.8 | -5.5 | -4.3 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 17.8 | -3.7 | -4.9 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 16.6 | 4.3 | 3.9 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 16.5 | -3.8 | -4.3 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 15.2 | -3.5 | -4.3 | SRP103736 | SRR5440882 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 15.0 | -3.5 | -4.3 | SRP103736 | SRR5440873 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 14.9 | -4.0 | -3.7 | SRP257291 | SRR11568018 | Gene expression in Arabidopsis expressing a Hyaloperonospora arabidopsidis effector |
| 14.0 | -4.1 | -3.4 | ERP115370 | ERR3333439 | Arabidopsis tissue atlas |
| 13.7 | -3.7 | -3.7 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 13.6 | -4.3 | -3.2 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 13.4 | -3.4 | -4.0 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 13.1 | -4.3 | -3.1 | SRP132865 | SRR6726416 | Molecular basis of flowering under natural long-day conditions in Arabidopsis |
| 13.0 | -2.1 | -6.1 | SRP091641 | SRR4426346 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.0 | 3.8 | 3.5 | SRP277946 | SRR12470208 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.0 | -3.5 | -3.7 | SRP274404 | SRR12356829 | Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6] |
| 12.6 | -2.1 | -6.1 | SRP091641 | SRR4426941 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.2 | -3.8 | -3.2 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 12.2 | -2.5 | -4.9 | SRP258701 | SRR11614791 | Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence |
| 12.1 | 3.2 | 3.8 | SRP311610 | SRR14028737 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 12.0 | -3.6 | -3.4 | SRP201680 | SRR9313625 | RNA-seq of 14 days old arabidopsis in Col hda6 ldl1/2 and hda6/ldl1/2 |
| 11.7 | -3.2 | -3.6 | SRP102178 | SRR5360867 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 11.6 | -3.3 | -3.5 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 11.4 | -2.4 | -4.8 | SRP155742 | SRR8699976 | Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors |
| 11.2 | 3.1 | 3.6 | SRP311610 | SRR14028739 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 11.1 | 3.2 | 3.5 | SRP311610 | SRR14028736 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 11.1 | 3.6 | 3.1 | SRP277946 | SRR12470189 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.9 | 2.8 | 3.9 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.9 | -3.3 | -3.3 | SRP074485 | SRR3480182 | Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth |
| 10.9 | -3.1 | -3.5 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.7 | 3.1 | 3.5 | SRP277946 | SRR12470188 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.7 | -2.4 | -4.4 | ERP116123 | ERR3414642 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.6 | -3.7 | -2.9 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 10.6 | -4.1 | -2.6 | SRP100712 | SRR5285681 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 10.5 | 3.2 | 3.3 | SRP311610 | SRR14028738 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 10.3 | 3.0 | 3.5 | SRP277946 | SRR12470190 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.3 | -3.4 | -3.1 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 10.3 | -2.3 | -4.4 | ERP116123 | ERR3414646 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.1 | -3.1 | -3.3 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.0 | -3.7 | -2.7 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
The preparation time of this page was 0.7 [sec].
