CoexViewer
Coexpression detail for AT2G23300 and AT1G28390
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT2G23300 | Leucine-rich repeat protein kinase family protein | 816862 | At2g23300 | 0.32 | 5.88 | 5.95 | 4.21 | 294.90 | 1.92 | 2.74 | -0.10 | 1.35 | 2.14 | 1.87 | |
| ath | AT1G28390 | Protein kinase superfamily protein | 839736 | At1g28390 | 0.32 |
|
coex z = 5.9464 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 816862 (z-scored expression) |
839736 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 29.1 | -8.4 | -3.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 20.1 | -4.6 | -4.4 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 17.4 | 4.8 | 3.6 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 15.2 | -3.5 | -4.3 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 15.2 | -4.0 | -3.8 | SRP165731 | SRR8054399 | The embryonic transcriptome of Arabidopsis thaliana |
| 15.2 | -4.0 | -3.8 | SRP165731 | SRR8054398 | The embryonic transcriptome of Arabidopsis thaliana |
| 15.1 | -3.3 | -4.5 | ERP013651 | ERR1194827 | Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid |
| 14.9 | -5.7 | -2.6 | SRP091641 | SRR4426683 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 14.9 | -5.0 | -3.0 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 14.3 | 4.3 | 3.4 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 14.0 | -3.6 | -3.9 | SRP337622 | SRR15931267 | Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency |
| 13.6 | 4.6 | 2.9 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 13.2 | -4.2 | -3.1 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 12.4 | -2.9 | -4.2 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 12.3 | -4.4 | -2.8 | SRP101641 | SRR5330614 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 12.3 | -2.8 | -4.3 | SRP097690 | SRR5197907 | Tissue-Specific Transcriptomics Reveals Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis |
| 12.3 | 3.6 | 3.4 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 11.9 | -3.6 | -3.3 | SRP066432 | SRR2925730 | Identification of MEDIATOR16 as the Arabidopsis COBRA suppressor, MONGOOSE1 |
| 11.7 | -2.8 | -4.1 | SRP083970 | SRR4115321 | The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq] |
| 11.5 | -2.7 | -4.2 | SRP100064 | SRR5263006 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 11.4 | -2.0 | -5.6 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 11.3 | -3.9 | -2.9 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.3 | -3.9 | -2.9 | SRP285119 | SRR12698763 | Time of day prioritizes the pool of translating mRNAs in response to heat stress |
| 10.9 | -3.5 | -3.1 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 10.8 | -4.1 | -2.6 | ERP021422 | ERR1827503 | Arabidopsis stem cell transcriptome |
| 10.7 | 4.1 | 2.6 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.6 | -3.3 | -3.2 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.5 | -1.9 | -5.4 | SRP282437 | SRR12642280 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 10.3 | -3.5 | -2.9 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 10.2 | -4.6 | -2.2 | SRP100938 | SRR5304638 | During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight. |
| 10.0 | 3.0 | 3.4 | SRP103736 | SRR5440841 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 10.0 | -3.0 | -3.4 | SRP233656 | SRR10555748 | Arabidopsis QUANTIREX |
The preparation time of this page was 0.7 [sec].
