CoexViewer

Coexpression detail for ATRER1C1 and AT2G18840
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath ATRER1C1 Rer1 family protein 816863 At2g23310 0.8 7.86 8.77 3.94
ath AT2G18840 Integral membrane Yip1 family protein 816399 At2g18840 0.8
Platform:

coex z = 8.7731



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 816863
(z-scored expression)		 816399
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.7 -5.9 -6.1 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.5 -5.4 -5.1 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.3 -3.8 -6.4 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
21.2 -4.5 -4.7 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
18.7 -4.8 -3.9 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
18.1 -4.7 -3.9 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
17.9 -5.0 -3.6 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
17.5 -4.4 -4.0 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
16.1 -4.0 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.2 -4.3 -3.6 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
14.7 3.9 3.7 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
13.7 -4.6 -3.0 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
13.6 -3.6 -3.8 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.5 4.5 3.0 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.4 3.7 3.7 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
13.3 -3.7 -3.6 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
13.2 3.6 3.7 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
13.2 3.7 3.6 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
13.1 3.5 3.8 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.9 -3.7 -3.5 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.8 3.7 3.4 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.8 3.8 3.3 SRP324081 SRR14813597 ARATH-IN-OUT
12.8 3.8 3.3 SRP362867 SRR18254734 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
12.4 3.9 3.2 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
12.4 -3.2 -3.9 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
12.2 -3.9 -3.1 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.2 -4.2 -2.9 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
12.1 3.4 3.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.8 3.3 3.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 3.5 3.4 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 -3.3 -3.5 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.5 -3.3 -3.5 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.5 -3.5 -3.3 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.3 3.7 3.1 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
11.2 -3.2 -3.5 SRP285119 SRR12698780 Time of day prioritizes the pool of translating mRNAs in response to heat stress
11.1 -3.1 -3.5 SRP117360 SRR6030903 The Arabidopsis transcription factor TCP5 during petal and inflorescence development
11.1 -3.3 -3.3 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.0 -3.4 -3.2 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 -2.8 -3.9 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.9 3.4 3.2 SRP277946 SRR12469855 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 3.4 3.2 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.8 -3.8 -2.9 SRP066432 SRR2925730 Identification of MEDIATOR16 as the Arabidopsis COBRA suppressor, MONGOOSE1
10.8 3.2 3.3 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.8 -2.6 -4.1 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.8 3.1 3.5 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 -3.1 -3.4 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
10.7 -3.5 -3.1 SRP132865 SRR6726414 Molecular basis of flowering under natural long-day conditions in Arabidopsis
10.6 -3.2 -3.4 SRP114806 SRR5894775 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.6 -3.2 -3.3 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.6 -3.2 -3.3 SRP279454 SRR12554216 RNA-seq analysis of WT, aipp3, aipp2, paipp2, aipp2/paipp2, cpl2, lhp1, and clf in Arabidopsis
10.5 -3.0 -3.6 SRP119072 SRR6113965 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.5 3.2 3.3 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -3.8 -2.8 SRP277946 SRR12469603 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -2.2 -4.8 SRP297585 SRR13239290 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
10.4 -3.9 -2.6 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.4 3.1 3.3 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.3 -3.1 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.3 3.5 3.0 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 3.5 2.9 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.8 -2.7 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.2 -2.7 -3.8 SRP073485 SRR3401791 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.1 3.3 3.1 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.0 -3.6 -2.8 SRP090457 SRR4295748 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
10.0 -1.8 -5.5 SRP267137 SRR12005766 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
Note: Samples whose contribution is more than 10 are outputted.



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