CoexViewer

Coexpression detail for ATRER1C1 and VAP27-1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath ATRER1C1 Rer1 family protein 816863 At2g23310 0.8 8.50 8.44 6.25 7.50 1.86 4.49 2.11 3.81 1.71 2.49
ath VAP27-1 vesicle associated protein 825231 At3g60600 0.8
Platform:

coex z = 8.4406



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 816863
(z-scored expression)		 825231
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
36.6 -5.9 -6.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
30.0 -5.4 -5.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
25.6 -5.0 -5.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
22.3 -4.4 -5.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
20.9 3.9 5.4 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
20.3 -4.8 -4.2 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
19.7 -4.7 -4.2 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
19.1 -4.5 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
19.1 -4.3 -4.5 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
18.3 4.5 4.1 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.7 -3.9 -4.3 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
16.1 -4.0 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.4 -4.6 -3.3 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.3 3.9 3.9 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
15.1 -3.9 -3.9 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
14.5 3.5 4.2 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
14.5 3.7 3.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.1 -3.8 -3.7 SRP066432 SRR2925730 Identification of MEDIATOR16 as the Arabidopsis COBRA suppressor, MONGOOSE1
13.9 3.6 3.9 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
13.9 -3.5 -4.0 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.7 3.7 3.7 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
13.7 3.7 3.7 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.7 -3.7 -3.7 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.6 4.1 3.3 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.6 -3.6 -3.8 SRP090457 SRR4295748 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
13.5 -3.4 -4.0 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
13.5 -3.8 -3.5 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
13.3 3.5 3.8 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 3.7 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.6 -3.7 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.6 3.3 3.8 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
12.5 -3.6 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.4 -3.3 -3.7 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.2 3.5 3.5 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 -3.1 -3.9 ERP115370 ERR3333436 Arabidopsis tissue atlas
12.1 -3.2 -3.8 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
12.0 -4.2 -2.9 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
11.9 3.7 3.2 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
11.8 3.3 3.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 -3.1 -3.8 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.8 3.4 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.7 3.5 3.4 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.6 3.8 3.0 SRP324081 SRR14813597 ARATH-IN-OUT
11.6 3.8 3.0 SRP362867 SRR18254734 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
11.2 3.4 3.3 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.2 -2.8 -4.0 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.0 -3.2 -3.5 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.0 3.2 3.4 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 3.1 3.5 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 -3.3 -3.3 SRP238842 SRR10769007 Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brm-3, brip1, brip2, brip1 brip2, brip1 brip2 brm-3 and brip1 brip2 brm-1 seedlings.
10.8 -3.1 -3.4 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
10.8 -3.4 -3.2 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.8 -3.8 -2.8 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.7 -3.1 -3.5 SRP126872 SRR6381404 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.7 3.3 3.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.6 -3.5 -3.0 SRP334993 SRR15679198 Next Generation Sequencing Facillitates Quantitative Analysis of Wild Type and snrk1a1/a2 mutant Transcriptomes
10.5 -3.3 -3.2 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.2 -3.2 SRP285119 SRR12698780 Time of day prioritizes the pool of translating mRNAs in response to heat stress
10.3 -3.3 -3.1 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.3 3.1 3.3 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.1 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 3.2 3.2 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 3.2 3.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 -3.2 -3.2 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.1 -3.1 -3.3 ERP013651 ERR1194827 Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
10.1 -3.1 -3.3 SRP145580 SRR7160920 Gene expression responses to ABA and to osmotic stress in the pyl112458 379101112 mutant
Note: Samples whose contribution is more than 10 are outputted.



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