CoexViewer

Coexpression detail for AT2G24250 and EMB3101
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT2G24250 LOW protein: F-box/kelch-repeat protein (DUF295) 816959 At2g24250 0.26 4.87 5.03 3.39 14.90 0.83 3.31 1.69 2.26 0.34 1.94
ath EMB3101 Tetratricopeptide repeat (TPR)-like superfamily protein 837065 At1g05600 0.26
Platform:

coex z = 5.0318



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 816959
(z-scored expression)		 837065
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.7 -5.8 -6.0 ERP115370 ERR3333443 Arabidopsis tissue atlas
33.7 -5.2 -6.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
31.3 -4.6 -6.8 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
30.7 -8.1 -3.8 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
25.9 -7.1 -3.7 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
24.3 -5.6 -4.4 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
23.7 -6.0 -4.0 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
20.9 -5.0 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
20.4 -3.7 -5.5 SRP104760 SRR5467210 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
18.9 -4.0 -4.8 SRP149815 SRR7267263 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
16.9 -5.8 -2.9 SRP325022 SRR14877136 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
16.6 -3.2 -5.2 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.4 -3.8 -4.3 SRP103817 SRR5444399 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
15.7 -3.8 -4.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
15.3 -3.7 -4.1 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
14.9 -4.1 -3.6 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
14.9 -3.6 -4.2 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.4 -5.6 -2.6 SRP220476 SRR10072785 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
14.4 -3.7 -3.8 SRP091641 SRR4426949 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
14.2 -3.8 -3.7 SRP334993 SRR15679198 Next Generation Sequencing Facillitates Quantitative Analysis of Wild Type and snrk1a1/a2 mutant Transcriptomes
13.0 -3.9 -3.4 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.8 -4.2 -3.1 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
12.6 -3.7 -3.4 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.4 -6.6 -1.9 SRP189792 SRR8800716 Role of AtMLKLs in response to powdery mildew fungus
12.2 -5.0 -2.5 SRP285119 SRR12698757 Time of day prioritizes the pool of translating mRNAs in response to heat stress
12.2 -3.6 -3.4 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
12.0 -3.5 -3.4 SRP086629 SRR4175036 A global view of RNA-protein interactions reveals novel root hair cell fate regulators
11.8 -3.9 -3.0 SRP234036 SRR10560326 Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM)
11.7 -3.7 -3.2 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
11.5 -3.2 -3.6 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.5 -3.7 -3.1 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.5 -3.9 -2.9 SRP237340 SRR10677199 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
11.2 -3.5 -3.2 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
11.0 3.3 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.0 -3.0 -3.7 SRP150217 SRR7289598 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.8 3.4 3.2 SRP071947 SRR3234398 Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I]
10.7 3.3 3.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.6 -2.8 -3.8 SRP091641 SRR4426360 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.6 -2.8 -3.8 SRP091641 SRR4426947 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.3 -2.9 -3.5 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
10.2 -4.1 -2.5 SRP090457 SRR4295785 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
10.0 -3.4 -2.9 SRP145580 SRR7160920 Gene expression responses to ABA and to osmotic stress in the pyl112458 379101112 mutant
10.0 -1.8 -5.5 SRP100064 SRR5263187 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.0 -1.8 -5.5 SRP100064 SRR5263034 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.0 -3.3 -3.1 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
Note: Samples whose contribution is more than 10 are outputted.



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