CoexViewer

Coexpression detail for AT2G25530 and PHR1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT2G25530 AFG1-like ATPase family protein 817091 At2g25530 0.32 9.39 8.49 7.75 8.20 2.73 4.80 0.83 1.76 3.88 3.11
ath PHR1 photolyase 1 837792 At1g12370 0.32
Platform:

coex z = 8.4904



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 817091
(z-scored expression)		 837792
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
23.7 -4.7 -5.1 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
21.3 -3.4 -6.2 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
19.8 -2.6 -7.7 SRP100712 SRR5285681 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
18.5 -4.4 -4.2 SRP139506 SRR6982866 Cell type identity determines transcriptomic immune responses in Arabidopsis thaliana roots
18.2 -4.2 -4.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
18.2 4.2 4.4 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
18.0 -3.3 -5.4 SRP214585 SRR9681283 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
18.0 -3.3 -5.4 SRP214585 SRR9681286 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
16.9 -3.1 -5.4 SRP311610 SRR14028820 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
16.1 -3.4 -4.7 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
13.9 -2.5 -5.6 SRP187381 SRR8662040 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
12.7 -3.4 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.4 4.6 2.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.1 3.5 3.5 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.8 -3.6 -3.3 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
11.7 -2.1 -5.6 SRP187381 SRR8662036 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
11.6 -2.5 -4.7 SRP017386 SRR627685 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.6 -3.4 -3.4 SRP274404 SRR12356829 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
10.8 -3.1 -3.4 SRP097877 SRR5205675 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.8 2.9 3.7 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 3.1 3.4 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 -3.8 -2.8 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.5 -2.2 -4.8 SRP277946 SRR12469999 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 -2.5 -4.2 ERP116123 ERR3414697 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.3 3.0 3.5 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.3 3.2 3.2 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.6 -2.8 ERP015521 ERR1406274 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.2 -3.6 -2.8 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
10.1 -3.4 -3.0 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -3.1 -3.3 SRP083970 SRR4115362 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
10.0 -4.0 -2.5 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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