CoexViewer

Coexpression detail for AT2G25730 and BIG
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT2G25730 zinc finger FYVE domain protein 817114 At2g25730 0.88 7.76 7.31 6.12 598.70 1.09 2.40 2.27 0.79 0.31 4.83
ath BIG auxin transport protein (BIG) 820398 At3g02260 0.88
Platform:

coex z = 7.3099



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 817114
(z-scored expression)		 820398
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
32.7 -4.0 -8.2 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
29.1 -5.4 -5.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
27.7 -5.9 -4.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
25.4 -4.7 -5.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.4 -3.5 -5.5 SRP277946 SRR12469574 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
19.3 -4.1 -4.7 SRP220476 SRR10072739 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
17.6 -3.8 -4.6 SRP220476 SRR10072740 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
17.1 -4.2 -4.1 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
16.6 4.4 3.8 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
16.0 -3.9 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.9 -3.4 -4.7 SRP220476 SRR10072738 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
15.6 -3.7 -4.2 SRP277946 SRR12469806 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.3 -3.0 -5.1 SRP282437 SRR12642226 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
14.7 -3.8 -3.9 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
13.9 -3.9 -3.6 SRP176451 SRR8404535 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
13.8 3.7 3.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.4 2.9 4.6 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
13.4 3.9 3.4 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.2 -3.3 -4.0 SRP090913 SRR4360366 WallOmics
13.1 3.1 4.2 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
13.0 3.7 3.5 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.8 -3.4 -3.7 SRP198083 SRR9045751 Role of cis-zeatin in root responses to phosphate starvation
12.3 -2.9 -4.2 SRP277946 SRR12469866 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 -4.5 -2.7 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
12.1 3.4 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.1 3.5 3.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 -3.7 -3.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.0 -3.8 -3.2 SRP119870 SRR6166379 Transcriptomic characterization of spl7 and Col-0 ecotypes of Arabidopsis reveals new aspects of Fe-Cu crosstalk
12.0 -3.8 -3.2 SRP162520 SRR7899134 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
11.8 -3.7 -3.2 SRP253507 SRR11359762 Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis
11.8 3.7 3.2 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 -3.2 -3.6 SRP190896 SRR8850907 mRNA sequencing of msh1 memory line and non-memory (normal looking) sibling plants with isogenic Col-0 wild-type control in Arabidopsis
11.6 -3.2 -3.6 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.5 -3.4 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.4 3.5 3.3 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 2.7 4.2 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.3 -3.7 -3.1 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
11.3 -3.3 -3.4 SRP076846 SRR3707344 The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status (mRNA-seq)
11.2 -3.3 -3.4 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.2 3.4 3.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.2 -5.0 -2.2 ERP123539 ERR4471737 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.2 -5.0 -2.2 ERP123539 ERR4471736 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.1 -3.3 -3.3 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.1 3.4 3.3 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.0 -3.2 -3.4 SRP277946 SRR12469709 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -2.9 -3.7 SRP063017 SRR2221848 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
10.9 -3.7 -3.0 SRP137763 SRR6950045 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.8 3.3 3.3 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 3.2 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.6 -3.4 -3.1 SRP257291 SRR11568018 Gene expression in Arabidopsis expressing a Hyaloperonospora arabidopsidis effector
10.4 -3.4 -3.1 ERP115370 ERR3333436 Arabidopsis tissue atlas
10.4 -2.8 -3.7 ERP116123 ERR3414637 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.3 3.5 3.0 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 3.6 2.9 SRP371011 SRR18808229 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.3 3.3 3.1 SRP154323 SRR7536248 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
10.2 3.2 3.2 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.2 -3.0 -3.4 SRP126872 SRR6381404 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.2 -3.3 -3.1 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 -2.7 -3.7 SRP281951 SRR12620957 RNA-Seq experiment on Arabidopsis seedlings regarding SLIM1 and EIL1 function at low S
10.1 3.0 3.4 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 2.9 3.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 -3.3 -3.0 ERP115370 ERR3333439 Arabidopsis tissue atlas
Note: Samples whose contribution is more than 10 are outputted.



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