CoexViewer
Coexpression detail for CYCB1;4 and AT3G51930
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | CYCB1;4 | Cyclin B1;4 | 817217 | At2g26760 | 0.29 | 7.82 | 8.07 | 4.65 | |
| ath | AT3G51930 | Transducin/WD40 repeat-like superfamily protein | 824356 | At3g51930 | 0.29 |
|
coex z = 8.0747 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 817217 (z-scored expression) |
824356 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 30.5 | -4.9 | -6.2 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 23.3 | -4.8 | -4.9 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 18.6 | -4.7 | -4.0 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 17.2 | -4.2 | -4.1 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 16.4 | -3.5 | -4.7 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 15.1 | -3.7 | -4.1 | SRP279992 | SRR12582696 | Gene expression responses to ABA and to osmotic stress in the bon123 triple mutant |
| 14.6 | -2.6 | -5.7 | SRP282437 | SRR12642287 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 14.3 | -4.9 | -2.9 | SRP151058 | SRR7408199 | botrytisxn - Nitrogen nutrition and pathogen susceptibility: priming by metabolism. |
| 13.9 | -3.9 | -3.6 | SRP238608 | SRR10760446 | Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock |
| 13.9 | -3.9 | -3.6 | SRP238608 | SRR10760444 | Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock |
| 13.5 | -3.4 | -4.0 | ERP115370 | ERR3333441 | Arabidopsis tissue atlas |
| 12.4 | -2.9 | -4.2 | SRP150217 | SRR7289598 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.1 | -3.5 | -3.4 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 12.0 | 3.3 | 3.6 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 11.7 | -4.1 | -2.9 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 11.7 | -4.2 | -2.8 | SRP125388 | SRR6312356 | Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration |
| 11.5 | -2.1 | -5.4 | SRP201971 | SRR9331189 | RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types |
| 11.3 | -3.7 | -3.1 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.0 | -3.3 | -3.3 | SRP191093 | SRR8859574 | RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes. |
| 11.0 | -3.4 | -3.3 | SRP242317 | SRR10905209 | The characterization of Mediator12 and 13 as conditional positive gene regulators in Arabidopsis [RNA-seq] |
| 10.9 | -3.8 | -2.9 | SRP048829 | SRR1610315 | Enhanced Salicylic Acid Biosynthesis Is Involved in Heterosis for Bacterial Defense in Arabidopsis |
| 10.9 | -3.8 | -2.9 | SRP048829 | SRR1610306 | Enhanced Salicylic Acid Biosynthesis Is Involved in Heterosis for Bacterial Defense in Arabidopsis |
| 10.9 | -3.5 | -3.1 | SRP090458 | SRR4295877 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat] |
| 10.7 | -3.1 | -3.5 | SRP187062 | SRR8645802 | Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis |
| 10.7 | -3.5 | -3.0 | SRP114806 | SRR5894454 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.6 | -2.9 | -3.6 | SRP097877 | SRR5205675 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.5 | -2.7 | -3.9 | SRP050945 | SRR1696837 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 10.5 | -2.7 | -3.8 | SRP058628 | SRR2037344 | Transcriptome profiles and comparison of Arabidopsis thaliana woody (soc1-ful) and WT (Col-0) stems. |
| 10.3 | -3.6 | -2.9 | SRP170953 | SRR8249036 | Gene Expression Atlas of Embryo Development in Arabidopsis |
| 10.3 | -3.2 | -3.2 | SRP065316 | SRR2828722 | Correlative Controls of Seeds over Maternal Growth and Senescence in Arabidopsis |
| 10.2 | -2.6 | -3.9 | SRP185814 | SRR8570493 | RNA-seq analysis reveals organ-specific cold response in Arabidopsis thaliana |
| 10.1 | -3.4 | -3.0 | SRP187062 | SRR8645798 | Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis |
The preparation time of this page was 0.8 [sec].
