CoexViewer

Coexpression detail for CDPMEK and CJD1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath CDPMEK 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 817234 At2g26930 0.54 7.40 7.08 5.73 27.30 2.33 2.61 2.93 2.83 0.61 3.54
ath CJD1 Chloroplast J-like domain 1 837386 At1g08640 0.54
Platform:

coex z = 7.0771



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 817234
(z-scored expression)		 837386
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
47.2 -6.8 -7.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
30.5 -5.9 -5.2 ERP115370 ERR3333443 Arabidopsis tissue atlas
26.1 -5.2 -5.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
23.2 -4.8 -4.8 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
21.0 -3.9 -5.4 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
18.1 -3.9 -4.7 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
18.1 -3.9 -4.7 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
17.3 -4.9 -3.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
17.1 -4.1 -4.2 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.3 4.0 4.1 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.4 -3.9 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.3 -3.8 -4.0 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.8 -4.0 -3.7 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
13.7 3.6 3.8 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.7 -4.0 -3.5 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
13.6 3.7 3.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.3 -4.0 -3.4 ERP116123 ERR3414876 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
12.9 -3.4 -3.7 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.7 -3.8 -3.3 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.6 -3.9 -3.3 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
12.3 -4.6 -2.7 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.8 -3.5 -3.4 SRP286047 SRR12762107 The impact of the genes BBX32 and HY5 on the high light - responsive transcriptome of Arabidopsis thaliana
11.7 -3.9 -3.0 SRP105272 SRR5482536 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
11.6 -6.7 -1.7 SRP100712 SRR5285649 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.2 3.3 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.1 3.4 3.3 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.1 -3.2 -3.4 SRP150217 SRR7289598 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.1 3.2 3.5 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.0 3.3 3.4 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 3.3 3.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.9 -3.4 -3.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 3.3 3.3 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.8 -3.7 -2.9 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
10.8 -3.3 -3.2 SRP091641 SRR4426789 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.7 3.1 3.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.7 -3.1 -3.4 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 -3.3 -3.2 SRP162520 SRR7899136 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
10.7 -3.3 -3.3 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.7 -3.3 -3.3 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.5 -2.9 -3.6 SRP051513 SRR1734309 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
10.3 -3.1 -3.4 SRP119072 SRR6113964 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.2 3.7 2.8 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
10.1 3.4 3.0 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
10.0 2.9 3.4 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
Note: Samples whose contribution is more than 10 are outputted.



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