CoexViewer
Coexpression detail for AT2G28870 and AT3G62820
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT2G28870 | cyclin-dependent kinase inhibitor SMR1-like protein | 817436 | At2g28870 | 0.19 | 5.98 | 4.58 | 5.76 | 51.40 | 1.56 | 0.56 | 1.26 | 4.42 | -0.12 | 5.03 | |
| ath | AT3G62820 | Plant invertase/pectin methylesterase inhibitor superfamily protein | 825457 | At3g62820 | 0.19 |
|
coex z = 4.5829 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 817436 (z-scored expression) |
825457 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 24.6 | -5.2 | -4.7 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 24.2 | 4.8 | 5.0 | ERP123539 | ERR4471741 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 18.8 | -4.9 | -3.8 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 18.2 | -7.0 | -2.6 | SRP091641 | SRR4426789 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 17.8 | 5.9 | 3.0 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 16.1 | -5.8 | -2.8 | SRP132865 | SRR6726407 | Molecular basis of flowering under natural long-day conditions in Arabidopsis |
| 14.9 | -4.8 | -3.1 | ERP116123 | ERR3414641 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 14.9 | 6.0 | 2.5 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.9 | -3.0 | -4.6 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 13.6 | -3.9 | -3.5 | SRP315390 | SRR14275190 | The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome |
| 12.6 | -6.0 | -2.1 | SRP090457 | SRR4295754 | RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions |
| 12.2 | -3.6 | -3.4 | SRP103817 | SRR5444399 | Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana |
| 12.1 | -3.9 | -3.1 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 11.9 | -3.4 | -3.5 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.7 | -3.3 | -3.5 | SRP091641 | SRR4426346 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.7 | -3.0 | -3.9 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 11.7 | -3.4 | -3.4 | SRP102178 | SRR5360849 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 11.6 | -3.9 | -3.0 | SRP097877 | SRR5205688 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 11.6 | -4.3 | -2.7 | SRP159259 | SRR7774155 | Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress. |
| 11.5 | -3.1 | -3.8 | SRP253436 | SRR11356191 | Transcriptome profiling of Arabidopsis tac1 and lazy1 mutant shoot tips under normal and gravistimulated conditions |
| 11.4 | -4.8 | -2.4 | ERP116123 | ERR3414638 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 11.4 | -2.8 | -4.0 | SRP238608 | SRR10760446 | Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock |
| 11.0 | -3.7 | -2.9 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.9 | -3.2 | -3.4 | SRP193460 | SRR8944888 | Selective egg cell polyspermy bypasses the triploid block |
| 10.8 | -1.8 | -6.0 | SRP114806 | SRR5894583 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.8 | -4.4 | -2.4 | SRP346154 | SRR16948976 | Plants grow in lunar regolith |
| 10.5 | -3.3 | -3.2 | SRP091641 | SRR4426344 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.5 | -4.9 | -2.1 | SRP154321 | SRR7536090 | Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse] |
| 10.4 | 3.2 | 3.2 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 10.0 | -4.0 | -2.5 | SRP119072 | SRR6113965 | Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana |
The preparation time of this page was 2.5 [sec].
