CoexViewer

Coexpression detail for PCNA2 and AT3G14740
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath PCNA2 proliferating cell nuclear antigen 2 817506 At2g29570 0.45 8.32 7.61 6.78 66.80 3.59 2.85 3.10 3.84 1.05 4.58
ath AT3G14740 RING/FYVE/PHD zinc finger superfamily protein 820702 At3g14740 0.45
Platform:

coex z = 7.6092



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 817506
(z-scored expression)		 820702
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.5 -5.6 -6.1 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
17.6 -4.7 -3.7 SRP073487 SRR3401835 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
17.1 -5.4 -3.2 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
17.0 -4.4 -3.9 ERP115370 ERR3333443 Arabidopsis tissue atlas
17.0 -4.6 -3.7 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
17.0 -4.6 -3.7 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.0 -4.4 -3.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
14.7 -2.9 -5.1 SRP091641 SRR4449319 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.7 -7.0 -2.0 ERP116123 ERR3414885 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
13.7 -4.0 -3.4 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.4 -3.4 -3.9 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.8 -3.1 -4.1 SRP149815 SRR7267306 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
12.7 -4.0 -3.2 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.9 -3.5 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.8 -2.4 -5.0 SRP110167 SRR5742214 mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
11.7 -2.9 -4.0 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
11.6 -2.5 -4.6 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.3 -3.9 -2.9 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.3 -3.2 -3.6 SRP044776 SRR1523938 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
10.9 -3.5 -3.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
10.8 -3.5 -3.1 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
10.8 -2.1 -5.1 SRP091641 SRR4426436 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.8 -3.5 -3.1 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
10.6 -2.6 -4.1 SRP277946 SRR12470052 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.3 -3.2 SRP126872 SRR6381404 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.5 -2.8 -3.8 ERP015521 ERR1406265 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.5 -2.9 -3.7 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.1 -3.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
10.4 -3.1 -3.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
10.4 -2.7 -3.9 SRP242317 SRR10905209 The characterization of Mediator12 and 13 as conditional positive gene regulators in Arabidopsis [RNA-seq]
10.2 -3.8 -2.7 SRP187062 SRR8645799 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
10.1 -3.2 -3.2 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
10.1 -2.9 -3.5 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.0 -1.9 -5.2 SRP090458 SRR4295909 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.0 -3.0 -3.4 SRP044776 SRR1523942 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
10.0 -3.0 -3.3 SRP150217 SRR7289598 Widespread inter-individual gene expression variability in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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